Globicephala melas (long-finned pilot whale): 115866311
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Entry
115866311 CDS
T11080
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04064
NF-kappa B signaling pathway
gmf04622
RIG-I-like receptor signaling pathway
gmf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
115866311 (TRIM25)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115866311 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115866311 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115866311 (TRIM25)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115866311 (TRIM25)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115866311 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-B_box
C5HCH
IDEAL
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
115866311
NCBI-ProteinID:
XP_030737499
LinkDB
All DBs
Position
20:52341428..52364515
Genome browser
AA seq
636 aa
AA seq
DB search
MAMAELCPLAEELSCSICLEPFKGPVTTPCGHNFCGSCLDQTWAVQGPPYLCPQCRTGFQ
TRPQLHKNTVLCAVVEQFLQAEQVRPELPDDWTPPTRAAAPNQADQVPCDHCLKAAAVKT
CLVCTVSFCQEHLRPHLDSPAFRDHPLQPPIRDLMRRKCPQHNRLRDFFCPEHGECICHI
CVVEHKTCSPAPLSQASTDLENKLRHKLTVMYSQINGASRALEDVRARQQDVREVAHRKM
DQLRQEYMEMKALIDASEANSTRKIKEEEKRVNSKFDNIYQILLKKKSEIQTLKEEIELA
LTKGDEYEFLEKAAKLQGITTKPVYVPKVELNHELIKGVCQGTSELKNELKQYLKQLQDK
KPEELIIPGGPGGHDLPHMPKPPRPVKKIPKEEKKPKKPAPILVSASKLPTFGAPEHLVD
LKQTGQEAEAKVPARPLTPVTLKAKVLETFLAKSRPELLEYTVKVVLDHNTAHNKVTVSK
DYTVASVANVPQNYRSHPQRFTCCPQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYGSME
RQGHESRLGRNSASWCVEWFNTKISAWHNNVEKTLPSTKASRVGVLLNCDHGFVIFFAVA
DKVHLLYKYKVDFTEALYPAFWLFTTGATLSVCSSK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcggagctgtgccccctggccgaggagctgtcgtgctccatctgcctggag
cccttcaaggggccggtcaccacgccctgcggccacaacttctgcgggtcgtgcctggac
cagacgtgggccgtccagggcccgccgtacctatgcccgcagtgccgcaccggcttccag
acgcggccacagctgcacaagaacacggtgttgtgtgcggtggtggagcagttcctgcag
gccgagcaggtccgtcccgagctccccgacgactggacgccgcccacccgggccgccgcc
cccaaccaggccgaccaggtgccttgcgaccactgcctgaaggcggccgccgtcaagacg
tgcctggtgtgcacggtctccttctgccaggagcacctgcggccgcatctcgacagcccc
gccttccgggaccacccgctgcagccgcccatccgtgacctgatgcgccgcaagtgcccc
cagcacaaccggctgcgggacttcttctgccctgagcacggcgagtgcatctgccacatc
tgcgtagtggagcacaagacctgctcgcctgcgcccctgagtcaggccagcactgacctg
gagaacaagttgaggcataaactgactgtcatgtacagtcagatcaacggggcgtcaaga
gcactggaggacgtgagagccaggcagcaggacgtgcgggaggttgcacacaggaagatg
gaccagcttagacaagaatacatggaaatgaaggctctcattgatgcctcagaggccaac
tccacacgaaagataaaggaagaggagaagagggtcaacagcaagttcgacaacatttat
cagatcctcctcaagaagaagagtgagatccagaccctgaaggaagagattgaacttgcc
ctgactaagggggacgagtatgagtttctggagaaagcagcaaaactgcaaggaatcaca
acgaagccagtctatgtccccaaggtggagctgaatcacgagctgataaagggtgtctgt
cagggcacctctgagctcaaaaatgagctgaagcagtacctcaaacagctccaggacaag
aagcctgaggagctcatcatcccagggggccctggaggacatgacctgccgcacatgccg
aaacccccacggcctgtgaagaagatcccaaaagaagaaaagaaacccaagaaacctgcc
ccaatccttgtctcagccagcaagcttcccaccttcggagccccagaacatttagtggat
ctcaaacaaactggccaggaggctgaggccaaagtccccgccagaccgttgaccccagtg
actctcaaggccaaggtgctggagaccttcctagccaagtccaggcctgagctcctggag
tatactgttaaagtcgtcctggaccacaacactgcccacaacaaggtgactgtgtccaag
gactacaccgtagcttctgtggctaacgtaccccaaaactaccgatcacatccccagagg
ttcacatgctgccctcaggtgttgggcctgcactgctacaagaaagggatccactactgg
gaggtggagctgcagaagaacaacttctgtggggtgggcgtctgctatggcagcatggag
cggcagggccacgagagccggcttggccgcaacagtgcctcttggtgcgtggagtggttc
aataccaagatttctgcctggcacaacaacgtggagaaaaccctgccctccacaaaggcc
tcgcgagtgggcgtgcttctcaactgcgaccatggctttgtcatcttcttcgccgtggct
gacaaggtccacttgttgtataagtacaaggtggactttactgaagctctgtacccggcc
ttctggctgttcaccacaggcgccacgctctccgtctgctcctccaagtag
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