Globicephala melas (long-finned pilot whale): 115866333
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Entry
115866333 CDS
T11080
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115866333 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115866333 (RNF43)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115866333 (RNF43)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115866333 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
115866333
NCBI-ProteinID:
XP_030737566
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All DBs
Position
20:51007163..51068384
Genome browser
AA seq
784 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKKPTTSPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYQPGCRRARAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSLSQSLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLSG
PSRSAAARPTRPGPFLPSQEPGVGPRHHRLPRGAHPRAPGEPQRLAVAQSPSAQGWGLSH
LRCTLQHPATCPMPPRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYYSPEGERRREEAQPSMTSRPRSLDSVVPTG
ETQVSSHVHYHRHRHRHYKKRFQWHGRKSGPETGVPPSRPAIPRTQLQPELPSPDPQAAS
PSPAAPSGQLPSPQRPRALTEPAPGPADAASPSPGPSSLFHLQKSSLPVRHTQRKRRGSP
SEPSPASRPQDLAAHRVCQILPHYGPNLAYPWSPEAHPLIFGPPGLDRRLLPETPGPTYP
SSQPVWLCLTTRQPLGPYPSGEGPSEWSSGAPEGRPCPYPHCQVLPAQPGSEEEELEELC
EQAV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctacagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtactggcagcagcagtggagtctgaaaga
tcagctgagcagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtgtttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtacctgtgcaacgccagcgacgacgacaatctggag
cctggattcatcagcattgtcaagctggagagcccccagcgggccccccgcccctgcctg
tcactggccagcaaggcccggatggcgggggagcggggagccagcgccgtcctctttgac
atcacggaggatcgagctgctgctgaacagctgcagcagcccctggggctgacgtggcca
gtggtgttgatctggggtaatgatgccgagaagctgatggagtttgtgtataagaaccga
aaggcccacgttaggattgagctgaagaagcccacgacgtcgccagattatgacgtgtgg
atcctcctgacggtggtgggcaccatctttgtggtcatcctggcctcggtgctgcgcatc
cggtgccgcccccgtcacagcagaccggatccccttcagcagcgaacagcctgggccatc
agccagctggccaccaggaggtaccagcccggctgcaggagggcccgggccgagtggcca
gactcaggtagcagctgcagttcagcccctgtgtgcgccatctgcctggaggagttctcg
gagggccaggagctacgggtcatttcctgcctccatgagttccatcgtacctgtgtggac
ccctggctgcaccagcaccgcacctgccccctctgcatgttcaacatcgtagagggagat
tccctttctcagtccctgggaccgtctagatcttaccaagaaccaggccgaagactccac
ctcattcgccagcatcccggccatgcccactaccacctgcctgctgcctacctgtcgggc
ccttcccggagcgcagcggctcggcccacacggcctggtcccttcctaccatcccaggag
ccaggcgtgggccctcggcaccaccgcctccccagaggcgcacatccccgggctccaggc
gaaccacagcgcctggcagtggcccagagcccctctgcgcagggctgggggctgagccac
ctgcggtgcactttgcagcaccctgccacctgccccatgcccccacgccgggccaggcct
cacgacagcagcgggtctggagaaagctactgcacagaacgcagtggctacctggcagac
gggccagccagtgactccagttcagggccctgtcacggctcttcgagtgactcagtggtc
aactgcacggacatcagcctgcagggcatccacggcagcagttctaccttccgcagctcc
ctgagcagtgactttgaccccctggtgtactacagccctgaaggggagcgccggcgggag
gaggctcagcctagcatgacctctcggccccgttctttggactcggtggtgcccacaggg
gaaacccaggtttccagccatgtccactaccaccgccaccggcaccgccactacaaaaag
cgtttccagtggcacggcaggaagtctggcccagaaactggagtcccgccgtccaggcct
gccattcctcggacacaactccagccagagctgccttcacccgatccgcaagcagccagc
cccagcccagcagccccgtcaggacagctccccagcccgcaacggcccagggccctcacc
gagccagcccctgggccagcggacgccgccagccccagccctggtcccagcagcctcttc
cacttgcagaaatccagcctccctgtgcgacacacacagaggaaacggcgggggagtccc
tcagagccctccccagcctctcgaccccaggacttggccgcacaccgagtgtgccagatt
cttccccattatggccccaacctggcatatccttggtccccagaggcccacccattgatc
ttcggacctccgggcctggacaggaggctgctaccagaaaccccaggccctacttaccca
agttcacagccggtgtggttgtgtctgactacacgccagcccctaggaccatacccatct
ggggaggggccttccgaatggagttctggcgccccagagggtaggccatgcccttaccca
cactgccaggtgctgccagcccagcctggctcagaagaggaggagctcgaggagctgtgt
gaacaggccgtgtga
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