Globicephala melas (long-finned pilot whale): 115866354
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Entry
115866354 CDS
T11080
Symbol
VMP1
Name
(RefSeq) vacuole membrane protein 1
KO
K21248
vacuole membrane protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115866354 (VMP1)
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Gene cluster
GFIT
Motif
Pfam:
VTT_dom
DUF6709
DUF6766
Motif
Other DBs
NCBI-GeneID:
115866354
NCBI-ProteinID:
XP_030737646
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Position
20:complement(49798372..49928473)
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AA seq
406 aa
AA seq
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MAENGKNCDQRRVAMNKEQYNGNFTDPSSVNEKKRRDREERQNIVLWRQPLVTLQYFSLE
ILVILKEWTSRLWHRQSVVVSFLLLLAVLIATYYVEGAHQQYVQRIEKQFLLYAYWIGLG
ILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEPPYPDQIICPDEEGTEGTISL
WSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEGYQEFEEMLEHAETAQDF
ASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIK
MHIQKIFVIITFSKHIVEQMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHKSETGAPQG
ENWLSWMFEKLVVVMMCYFILSIINSMAQSYAKRIQQRLNSEEKTK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatggaaaaaattgtgaccagagacgtgtagcaatgaacaaggaacaatat
aatggaaacttcacagatccctcttcagtgaatgaaaagaagaggagggatcgggaagaa
aggcagaatattgtcctgtggagacagccactcgttaccttgcagtatttttctctggaa
atcctagtaatcttgaaggaatggacctcaagattatggcatcgtcaaagcgttgtggtg
tcttttttactgctgcttgctgtgcttatagctacgtattatgttgaaggagcacatcaa
cagtatgtgcaacgtatagagaaacagtttcttttgtatgcctactggataggcttagga
attttgtcttctgttgggcttggaacagggctgcacacctttctgctttatctgggtcca
catatagcttcagttacattagctgcttatgaatgcaattcagttaatttccctgaacca
ccctatcctgatcagattatttgtccagatgaagagggcactgaaggaaccatttcttta
tggagcatcatctcaaaagttaggattgaggcctgcatgtggggtattggtacagcgatc
ggagagctgcctccatattttatggccagggcagctcgcctctcaggtgcggaaccagat
gatgaaggctatcaggaatttgaagagatgctggaacatgcagagactgcacaagacttc
gcctcccgggctaaactggcagttcaaaacctagtacagaaggttggattttttggaatt
ttggcctgtgcttcgattccaaatcctctgtttgatctggctggaataacatgtggacac
tttcttgtacctttttggactttctttggtgcaaccctgattggaaaagcaataattaaa
atgcatatccagaaaatcttcgttatcataacattcagcaaacacatagtggagcagatg
gtggctttcattggtgctgtccctggcataggtccatctctgcagaagccattccaggaa
tacctggaggcccagcgtcagaagcttcaccacaaaagcgaaacgggcgcaccacaggga
gaaaactggttgtcctggatgtttgagaagttggttgttgtaatgatgtgttacttcatc
ctgtccatcattaactccatggcacaaagttatgccaaacgaatccagcagcggttgaac
tcagaggagaaaactaaataa
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