Globicephala melas (long-finned pilot whale): 115866389
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Entry
115866389 CDS
T11080
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmf03009
]
115866389 (DDX52)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115866389 (DDX52)
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
90S particles
Helicases
115866389 (DDX52)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-GeneID:
115866389
NCBI-ProteinID:
XP_030737773
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All DBs
Position
20:46932901..46953266
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AA seq
597 aa
AA seq
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MDAHDLFRRLGAGAKFDVRRFSADAARFKIGKRKYDFDSSEVLQGLDFFGNKKSVPGESE
SSRTHQELQDEEKNEESLTERKREQNKKKRKMTSEITSQEVSTIQWISSVEAKIEDKKVK
RENKLTSGKLEQLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEFKINSRLLQNILD
AGFQIPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISP
TRELASQIHRELVKISEGIGFRIHMIHKVAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQ
DPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQ
WCRLNLDNIITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSI
ERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVN
LVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYI
KGFQKLLSKQKKKMIKKPLERESISTTPKYFLEKAKDKRKKVTGQNSKKKVTPEDKS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctgtttcgccggctcggcgcgggggccaaattcgacgtgagacgc
ttctcggcggacgctgcccgattcaagataggaaaaaggaaatatgactttgattcttcg
gaggtgctacagggactggacttttttggaaacaagaagtctgtcccaggtgagagtgaa
tcatcaagaactcatcaggaactacaagatgaagagaaaaatgaagagagcctaactgaa
aggaagagggagcagaacaagaaaaagaggaagatgacttcagaaattacgtctcaagaa
gtttctactatacagtggatatcatctgtggaagcaaagattgaagataaaaaagttaaa
agagaaaataaactaacttcaggaaagttggagcagctcagaaaagaaaagataaacttc
ttccggaataaacataaaattcatgtccaaggaactgatcttcctgacccaattgctaca
tttcagcaacttgaccaggaatttaaaatcaattctcgactgcttcagaacattctagat
gcaggcttccagatacctacgccaatccaaatgcaagccattccagttatgctgcatggt
cgagaacttctggcttctgctcctactggatctggaaagactttggcttttagcattcct
attttaatgcacctgaaacaacccacaaacaaaggcttcagagccctgattatatcacca
acacgagaacttgccagccagattcaccgagagttagtaaaaatatctgagggaatagga
ttcaggatacacatgatccacaaagtagcagttgcagccaagaaatttggacctaaatca
tctaagaagtttgatattcttgtgactactccaaatcgactaatctatttattaaagcaa
gatcctccgggaatagacttaacaagtgttgaatggctggtagtagatgaatcagataaa
ctgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcttggcctgc
acatcccacaaggtcaaaagagctatgttcagtgcaacttttgcctatgatgttgagcag
tggtgcagacttaacttggataatatcattactgtttccattggagcaaggaattctgca
gtagagaccgtagaacaagagcttctcttcgttgggtctgagactggaaaacttctggcc
atgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcagtccatt
gaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtggatgttatt
catgcagacagaactcagcaacagagagataacacagtccatagcttcagagcaggaaaa
atctgggttcttatttgtacagccttgctagccagagggatcgattttaaaggtgtgaac
ctggtcatcaactatgactttccaaccagctcagtggaatatatccacaggataggtcga
actggaagagccgggcataaaggaaaagctgttacatttttcactgaagatgataaacca
ttattaagaagtgttgccaatgttatccagcaggccggatgtcctgtcccagaatacata
aaaggtttccagaaactactaagtaaacaaaagaaaaagatgattaagaagcctttggaa
agggagagcattagtacaactccaaaatatttcttagaaaaagctaaggataaacggaaa
aaggtcactggtcagaacagcaagaagaaagtaactcctgaggacaaaagttaa
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