Globicephala melas (long-finned pilot whale): 115866677
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Entry
115866677 CDS
T11080
Symbol
THSD1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115866677 (THSD1)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
115866677 (THSD1)
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GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
115866677
NCBI-ProteinID:
XP_060143808
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All DBs
Position
18:complement(15287611..15340430)
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AA seq
844 aa
AA seq
DB search
MKQMLKDFSNLLLVVLCDYVLGEAEYLLLGEPGHVALSNRTVSVDFQYLDGANGTLRNVS
VLLLEANTNQTVTTKYLLTNQSQGTLEFECFYFKEAGDYRFTMTPEATDSSPPVPWWERS
AFLKVEWPVFHVDLNRTSKAAEGTFQVGLFTSQPLCLFPMDKPGILVDVTFTNSLPEARM
SQGQPLEIRASKRAELAQGQWVEFGCAPVGPEAYVTVVLKLLGGDSVITSTGPIDLAQKF
GYALVMAPELTCESGVEVRVLPPPCIFVQGVIAVFREAPRRPGERTIRLAENSLTLGERR
TVFNCTLFDVGRHKYCFDFGVSSRSQFSAKEKECMLIQRNIETWGLWQPWSQCSATCGDG
VRKRRRLCLPSSPSRPGCPGMSSESSPCSLEDCTAFQPSSPSPFQPQTPVKSNNIVTVTG
ISLCLFIIVATVLITLWRKLGRAPKCSTPVHHNSLHAPGCRKNSDEENICELSEPRGSFS
DAGDGPAGSPAGQGIPLTYRRSVPAPPDDETSGSESFQSNAQKIIPPLFSYRLAQQQLKE
MKKKGLTETTKVYHVSQSPLTDTAIDAAVTARPGGSESPEEAAAGKFRLKSPFLEQPPAV
GAGDRPPSRLDHPLSPASCAVSPSQSLLRKSQMRSHPRGSHFRRTASFHEARQARPFRER
SLSTLTPRQAPAYSSRSRTWDQAGERVRPPSRGAALFPEKRDHCPGAGGSSGPLSPFPKP
HTLGQPTRKPDLGDRQAAFVAGGERTEPHRARRGPSPSHRNVSRKRPSSPAPRDSYQRVS
PLSPSQCRKDKCQSFPAHPEFAYYDNTSFGLTEAEQGMLDLPGYFGSNEEDETTSTLSVE
KLVI
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatgttgaaagacttttcaaatctattgttggtggtgctctgtgactacgtt
cttggagaagctgaatatctccttctgggggaaccgggccatgtagcactaagcaacagg
acagtgtctgtggatttccagtatttggatggcgccaatgggacgctgaggaatgtctct
gtcctgctgttggaggccaacaccaatcagactgttaccaccaaatacctcctgaccaac
cagtcccaggggaccctcgagtttgagtgcttctacttcaaggaggccggcgactaccgg
ttcacgatgactccggaagccacagacagcagccctccggtcccctggtgggagaggagc
gcctttctgaaggtggaatggcctgtctttcatgttgacctgaacaggacatccaaggca
gctgaaggcaccttccaggtgggcctttttaccagtcagccgctgtgcctgttccccatg
gacaagcccggcatcttggtggatgtcaccttcaccaacagccttccggaggcaaggatg
agtcagggccagccgctggagataagggctagcaagagggcagaactcgctcaaggccag
tgggttgagtttggctgtgcacctgtggggccggaagcctatgtcaccgtggtgctgaag
ctgctcggcggggactcggtcattacgtccacaggccccattgacctggcccagaagttt
ggatatgcactggtgatggcgccagagctcacctgtgagtccggggtggaggtgagggtg
ctgcccccgccatgcatctttgtccaaggggtgatcgctgtcttcagggaggcccccaga
cgccctggggaaaggaccatccggttggctgaaaacagtctgaccttgggagaaaggaga
acagtattcaactgcactttgtttgacgtggggaggcataaatactgctttgactttggc
gtctcaagcagaagccagttttctgcaaaggagaaggagtgcatgctaattcagagaaat
atagaaacttggggactgtggcagccgtggagccagtgtagtgccacgtgtggggacggt
gtcagaaagcgtcgccgcctgtgcctgccctcctccccctcccgacctggctgccctgga
atgtcgtcggagagctctccatgttccctggaggactgtacggctttccagccatccagt
ccgtctcctttccagccccagactcccgtgaagtccaacaacatcgtgacggtcactggg
atatccctgtgcttgttcatcattgtggccactgtgctcatcacgctgtggcggaagctg
ggccgcgcccccaagtgcagcaccccagtccaccacaactccctgcacgcgcccggctgc
cggaagaactcagacgaggagaacatctgcgagctgagcgagccccgtggcagcttctca
gatgctggcgacgggccggcggggagccccgcgggccagggcatccctctgacctaccgg
cggagcgtgccggcgccccccgatgacgagacctcgggcagcgagagcttccagtccaac
gcccagaagatcatcccacccctgttcagctaccgcctggcccagcagcagttgaaggag
atgaagaagaaaggcctgacggagaccaccaaggtgtaccacgtgtcccagagccccctg
acggacaccgccatcgacgccgccgtcaccgcacgcccgggaggctccgagagccccgaa
gaagccgcggccggcaagttccgcctcaaatccccgttcctggagcagccgcccgcggtc
ggcgccggggacaggcccccctcccggctggaccacccgctctcgccggccagctgcgcc
gtcagccccagccagagcctcctccgcaagtcgcagatgaggagccacccccgggggtcc
catttccggaggacggcaagtttccacgaggccaggcaggcccgaccgttccgggagcgg
agcctgtccaccctgaccccccggcaagcccccgcctacagctccaggagccggacgtgg
gaccaggcgggagagcgagtccggcccccgagtcgaggcgctgccctgtttccggagaaa
cgggaccactgtccaggggcaggtggaagcagtggcccgttaagccctttccctaaaccc
cacaccctggggcagcccacgaggaaaccagacctgggggatcgccaggcagcgttcgtg
gcgggaggtgagagaacggagcctcaccgggctcggaggggaccgtcccccagtcacagg
aatgtctcaaggaagcggccttcctccccggcccccagagatagctaccagagggtcagt
cctctgagcccttctcagtgtcggaaagacaaatgtcagagcttccccgcccacccggag
ttcgcctactacgacaacacatccttcggcctcactgaggcggagcaggggatgctggac
ctcccgggatattttgggtcaaacgaagaggatgaaaccacgagtacgctgagtgtggag
aagctggtcatctag
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