Globicephala melas (long-finned pilot whale): 115866702
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Entry
115866702 CDS
T11080
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115866702 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115866702 (EXOSC8)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115866702 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
115866702
NCBI-ProteinID:
XP_030738351
LinkDB
All DBs
Position
18:12473468..12479519
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AA seq
276 aa
AA seq
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MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSIGTADGSSLVKLGNTTVIC
GIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQVIQ
KEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVFKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggattcaaaactgtggaacctctggagtattacagaagattcttgaaagag
aattgccgtcctgatggaagagaacttggtgaattcaggaccacaactgtcaacataggt
tcaattggtactgcagatggttcttctttagtgaagctgggaaacactacagtaatttgt
ggaattaaagcggaatttggagcaccaccaacagatgcccctgataaaggatatgttgtt
cctaatgtggatctatcacctctgtgttcctggagatttcggtctggacctcctggagaa
gaggcccaggtggccagccagttcattgcagatgtcattgaaaattcacaggtaattcag
aaagaggacttgtgtatctctccaggaaagcttgcttgggttctatactgtgatctcatt
tgcctcaaccatgatggaaacattttggatgcttgcacctttgctttgttagcagcttta
aaaaatgtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtg
tttgatgacactctgcttatagttgaccctactgaagaggaggaaaacctggcaactgga
accttaacagtagtaatggacgaggaaggcaagctatgttgtcttcacaaaccaggtgga
agtggactgactggagctaaacttcaagattgtatgagccgagccgttacaagacacaaa
gaagtaaaaaaactgatggatgaagtatttaagagtatgaaacccaaataa
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