Globicephala melas (long-finned pilot whale): 115866787
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Entry
115866787 CDS
T11080
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115866787 (NUP58)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115866787 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115866787 (NUP58)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115866787 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
NET2A_C
PSY3
Nup49_C
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
115866787
NCBI-ProteinID:
XP_030738533
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Position
18:3268274..3302970
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AA seq
587 aa
AA seq
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MSTGFSFGSSTLGSSTVAASGSGTGGGFSFGTAASSSPSVGLSLGSLGSTAAPVTAPAPS
AGFGAGLFGSKPATGFTLGGTNTGPPATTSASTAGFSLGFSKPAASATPFALPITSASAG
GLTLSSALTSTPAASTGFTLSSLSGTAAAATTAPAGLSLGGALTGLGGPLFQSASTAASG
LGPNALGVSLGTAAAASAAGNEGLGGVDFSSSSDKKSDKTGTRPEDSKALKDETLPSVIC
QDVDNLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRNTLNIDKLK
IETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLA
TQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVF
EARRAEAKKWQNAPRVTTGPTPFSNMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGAPF
GSGIGTGLQSSGLGSSNLGGFGASSGFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSG
FNFSSPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggggttctccttcgggagcagcacgctgggctcctccaccgtggccgccagc
gggagcggcacgggaggcggtttctccttcgggaccgcggcgtctagcagcccttctgtg
gggctcagtcttgggagcctcgggagcacggcagctccagtgacagcacctgctccttct
gctggcttcggagccgggctctttggatctaagcctgccactgggttcactctaggagga
acgaacacaggcccaccggccaccacctctgcgtccacggcaggcttcagcttaggcttc
agtaaacccgcggcgtccgccacaccgtttgcgctgcccatcacgtctgcctcggctggc
ggtctcacgctctcgtccgctctgacgtcgactcctgcagcgtccacaggattcactctg
agcagcctgagtgggacggcagctgcagccaccactgcaccagcaggcctctctttaggg
ggagccttgacgggtttgggagggccgcttttccaaagcgcaagcacggcagcatcagga
cttggaccaaatgctttaggtgtgtctctgggaacggcagcagctgcttcagctgctggc
aacgaaggccttggaggcgtagattttagcagctcatcggataaaaagagtgataaaacg
ggaacaagaccagaggacagtaaagcactgaaggatgagactctaccttctgtcatctgc
caggacgtggacaacctgcagaaatttgtgaaggaacaaaaacaagtccaagaagaaatt
agtagaatgtcttcaaaagcaatgcttaaagtgcaggaagatattaaagctctgaagcag
cttttgtcattggctgccagtggattacagaggaacactctcaatattgacaaattgaaa
atagaaactgctcaggagttaaaaaatgctgaaatagctttaagaacccagaaaacacca
cctggactccaacatgagaatacagctcctgctgactacttcagaatcctggttcagcag
tttgaagtgcagctccagcagtacagacaacagattgaagaactggaaaaccatcttgcc
acccaagcgaacaattcacacatcacccctcaagatttgtcaatggctatgcagaaaatt
tatcaaacatttgtagctttagctgcacaacttcagtctattcatgaaaatgtgaaggtg
ctcaaagaacagtaccttggctacaggaaaatgttcttgggagatgctgtggatgtgttt
gaagccaggcgagcagaagccaagaagtggcagaatgcgcccagagtcactacgggaccc
acccctttcagcaacatgccaaacgcagcagccgttgccatggctgcaacacttacacag
cagcaacagcctgctacagggccacagccatctctgggagttagttttggagcgccattc
ggctcaggtattggcactggcttgcagtcaagtggcctaggttcttcaaaccttggaggc
tttggagctagctctggttttggatgcagcaccacaggggcctccacatttggatttgga
acaacaaataaaccctcaggaagtcttagtgcaggctttggcagctcaagtacatctggg
tttaacttcagcagtcctggcatcacggcgtcagctggtttgacatttggggtgtccaat
cctgcctctgcaggctttggaacaggaggacaactccttcagctgaagaagcctccagct
ggaaacaaaagaggaaaaagataa
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