Globicephala melas (long-finned pilot whale): 115866983
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Entry
115866983 CDS
T11080
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115866983 (PRDM1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115866983 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
115866983
NCBI-ProteinID:
XP_030738801
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All DBs
Position
14:36539821..36560313
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AA seq
823 aa
AA seq
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MLDICLEKRVGTTLAAPKCNSSAVKVPGLAEGTEGTMKMDMEDVDMTLWTEAEFEEKCTY
IVNDHPWDSGTEGGTSVQAEASLPRNLLFKYATNSKEVIGVVSKEYIPKGTRFGPLIGEI
YTSDTVPKNANRKYFWRIYSRGELHHFIDGFDEEKSNWLRYVNPAHSAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSHPKQQSTEKHELCP
KNVPKREYSVKEILKLDSHPSKGKDLYRSNISPLTSEKDADDFRKNGSPEMPFYPRVVYP
IRAPLPEDFLKASLAYGMERPPYIAHSPIPSSTTPSPSARSSPDRSLHSSPGNTVSPRAP
GSQEHRDPYAYLNSPYAAAAAEGLGSYPGYAPPPHLPPAFIPSYNAHYPKFLLPPYGMNC
NGLGAVGNINGLGSFGLFPRLYPVYGGLLGGGGLPPPMLAPASLPSSLPSEGARRLLQPE
HPREVLVPAPHSAFSLPGAAASLKDKACSPTSGSPTAGTAATAEHVVQPKATSAAAAAPG
GGDEAVNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGER
PFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQC
KACPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHLCSLKVHLKGYCPVAPATGLPLE
DLTRINEEIEKFDISDNADRLEDMEDNVDVTSVVEKEILAVVRKEKEETGLKVSLQRNMG
NGLLSGCSLYESTDPSLLKLPHSNPLPLGPVKVKQETVEPMDP
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgcccctaagtgtaac
tccagtgctgtgaaggttccagggttggcagaggggactgaggggaccatgaaaatggac
atggaggacgtggacatgactctgtggacagaggctgagtttgaggagaagtgtacatac
attgtgaacgaccacccctgggattctggcaccgaaggaggcacttcggttcaggcagag
gcatccttaccgaggaatctgcttttcaaatatgccacaaacagcaaagaggttattgga
gtggtgagtaaagaatacataccaaaggggacacgttttggacctctaataggtgaaatc
tacaccagtgatacagttcccaagaacgccaacaggaaatatttttggcggatctattcc
cgaggggagcttcaccacttcatcgatggctttgatgaggagaagagcaactggctgcgc
tacgtgaacccagcacattctgcccgggagcagaacctggccgcctgtcagaacggcatg
aacatctacttctacaccattaagcccatccccgccaaccaggagcttcttgtgtggtat
tgccgggactttgcggaaaggcttcactacccttatcctggagagctgacaatgatgaat
ctcacgcaaacccagagccatccaaagcagcagagcactgagaaacatgaactttgccca
aagaatgtcccgaagagagagtacagcgtgaaagaaatactaaaattggactcccacccc
tccaaagggaaggacttataccgctccaacatttcacccctcacttcggaaaaggacgcg
gatgactttcggaaaaatgggagccccgagatgcccttctacccgcgggtggtgtacccg
atccgggcccctctaccggaagactttctgaaagcttccctggcctacgggatggagcgg
ccgccctacatcgcgcactcccccatcccgtcctccacgacgcccagcccctcggcgcgc
agcagcccagaccggagcctgcacagcagccccgggaacaccgtgtcgccgcgggccccc
ggctcccaggagcaccgggacccttatgcctacttgaactctccgtacgccgccgccgcc
gctgaggggctgggctcctaccccggctacgcgccgcccccgcacctgccgcccgccttc
atcccttcctacaacgcgcactaccccaagtttctgctgcccccctacggcatgaactgc
aacggcctgggcgccgtgggcaacatcaacggcctcggcagcttcggcctcttcccgagg
ctgtaccccgtgtacggcggcctcctgggcgggggcggcctgcctcccccgatgctggcg
cccgcctcccttcccagctcgctgccctcggagggggcgcgccgcctgctgcagcccgag
cacccccgggaggtgctggtgcccgcgccgcacagtgccttctccctgcccggggcggcc
gccagcctgaaggacaaggcctgcagccccaccagcgggtccccgacggccggcaccgcc
gccacggccgagcacgtggtgcagcccaaagctacctcagcggccgcggcggcccccggc
ggcggcgacgaggccgtgaatctcatcaagaacaaaaggaacatgactggctacaagacg
ctcccctaccccctgaagaagcagaacggcaagatcaagtacgagtgcaacgtctgcgcc
aagacttttggccaactctcaaacctgaaggtccacctcagagtgcacagcggagaacga
cctttcaaatgccagacttgcaacaaaggcttcactcagctcgcccacctgcagaaacac
tacctggtacacacgggagagaagccacatgaatgccaggtttgccacaagcgatttagc
agcaccagcaatctcaagacccacctgcgactccactccggagagaaaccttaccagtgc
aaggcgtgccccgccaagttcacccagtttgtgcacctgaaactccacaagcgcctacac
acccgggagcggccccacaagtgtgcccactgccacaagagctacatccatctctgcagc
ctcaaggtccacctgaaggggtattgtcctgtggccccagccacggggctgcctctggag
gacctgaccagaatcaacgaagaaatcgagaagtttgacatcagcgacaatgccgaccgg
ctggaggacatggaggacaacgttgacgtgacctctgtggtggagaaggagattctggcc
gtggtcagaaaagagaaagaagaaactggcctgaaagtgtctttgcaaagaaacatgggg
aatggactgctctcaggatgtagcctctacgagtcaacagacccgtccctcctgaagttg
cctcacagcaacccactacctctgggacctgtaaaggtcaaacaagaaacagtcgaacca
atggatccttaa
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