Globicephala melas (long-finned pilot whale): 115867642
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Entry
115867642 CDS
T11080
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04612
Antigen processing and presentation
gmf05145
Toxoplasmosis
gmf05152
Tuberculosis
gmf05164
Influenza A
gmf05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
115867642 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115867642 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
115867642 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
115867642 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
115867642 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmf01001
]
115867642 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmf04054
]
115867642 (CIITA)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115867642 (CIITA)
Protein kinases [BR:
gmf01001
]
Serine/threonine kinases: Other
TAF1 family
115867642 (CIITA)
Pattern recognition receptors [BR:
gmf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115867642 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
115867642
NCBI-ProteinID:
XP_060141460
LinkDB
All DBs
Position
15:complement(29139710..29177359)
Genome browser
AA seq
1105 aa
AA seq
DB search
MELGPLEGGYLELLNSNADPLHLYHLYDRMDLAGEEELELCSEPDTDTINCEQFSRLLCD
MEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFIEHIGLEEMISESVEVLEEAGQKSQ
KRPFPEELPVDLKHRKLAEPLAMPVVTGAFLVGLVSDSSAQPCPSPPALFNKEPAPSQTR
LEDTVPPSSSLLSCLSLPAGPIQIIPTLSTLPQGLWQISGAGTGVSSILIYQGEMPQASQ
TPASSSTAVHSLPKSPDRPGSTSPFAPSAADLPSMPEPALTSRTNLTEDEMSPTQCPAAH
EASSKLPKWPESVEQFYCSLRNKYQAKPAGPEGILVEVDLVRVRLERSGGKSQDRELTTL
DWAERQPARGSLGEVLLASSNHRRPRETQVIAVLGKAGQGKSHWVQAVSWAWACGQLPQY
DFIFCIPCHCLDRPGDTYRLQDLLFSLGSQPLSVDDEVFSYILRRPDRILLILDAFEELE
AQDGFLHSAGGPTSAEARSLRGLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADALFE
VAGFSAQQAETYVMRYFECSGTTEHQKRALALLQSQPFLLSHSHSPTVCRAVCQLLEALL
ELGDEAQLPSTLTGLYVGLLGPGARDSPPGALVGLARLAWELGRGHQSSLREGQFPSAEV
RVWAVAQGLVQPTPGAPETKLAFSSFLLQCFLGAMWLALSSEIKDKELPQYLALTPRKKR
PYDNWLEGVPRFLVGLVFQPRACCLGALAGLAGSTSAVRKQEVLTRYLKRLQPGALKAGR
LLELLHCAHEALDAGLWQHVLQGLPAHLSFLGTRLTPPDTYVLGSALEAAGRDFSLDLRS
TGVDPSGLGSLVGLSCVTHFRAALSDTVELWESLQQHGEAKLLRAVKEKFTIEPFKAESM
KDVEDLGNLVQIQRTRSSSEDTPGELPAIRDLKKLEFALGPILGPQAFPKLVKILEAFSS
LQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDLGACKLAEALPLLAAS
LLRLSLYNNCICDVGAESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLRKCPHVEKL
AMWTPTIPFGVQEHLQQLDSRIILR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggagttggggcctctagaaggtgggtacctggagcttctcaacagcaatgctgaccct
ttgcatctctaccacctctatgaccggatggacctggctggagaagaagagctagagctc
tgctcagaacctgatacggacaccatcaactgcgaacagttcagcaggctgttgtgtgat
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtcttccaggattcccagctggagggcctgagcaaagacattttcatcgagcacatagga
ctggaagaaatgatcagcgagagtgtggaggtgctggaggaagcaggacagaaaagtcag
aaaagacccttcccagaggagctgcctgtggatctgaagcacaggaagctagctgagccc
ctagccatgcccgtggtgactggtgctttcctggtggggctagtgagtgactcttcagct
cagccctgcccatcaccacctgctctgttcaacaaggagccagcacccagccagacccgg
ctggaggacaccgtgcccccttccagttccttgttgagctgcctgagtctccctgctgga
cccatccagatcatccccactctctccactctgccccaggggctctggcaaatctcaggg
gctgggacaggggtctccagtatactcatctaccaaggtgagatgccccaggccagccaa
acacccgcctccagcagcacagctgtccacagcctcccaaagtccccagaccggcccggc
tccaccagcccctttgccccatcggcagctgacctccccagcatgcctgaaccagccctg
acctcccgtacaaacctaacagaggatgagatgtcccccacccaatgcccagcagctcac
gaggcatccagcaagcttcccaagtggcctgagagtgtggaacaattctactgctcgcta
cggaacaagtaccaggctaagcccgcaggcccagaaggcatcctggtggaggtggacctg
gtgagggtaaggctggagaggagcggcggcaaaagccaggacagagagctgaccaccctg
gactgggcagagcggcagccggcccgaggaagtctgggcgaggtgctgctggcctctagc
aaccaccggcggccacgtgagacgcaggtgatcgccgtgctgggcaaagcaggacagggg
aagagtcactgggtccaggccgtgagctgggcctgggcctgcggccagctgccacagtac
gactttatcttctgcatcccctgccactgtttggaccgtccgggggacacctaccgcctg
caggatctgctcttctccctgggttcacagccactgtcagtggacgacgaggtcttcagt
tacatcttgaggaggcccgaccgcattctgctcatcctggatgccttcgaggagctcgaa
gcccaagacggcttcctgcacagtgcgggcggacccacgtcggcagaagcccgctccctc
cgggggctgctggcgggcctcttccagcgcaagctgctgagaggctgcaccctgctgctt
acagcccggccccggggccgcctggcccagagcctgagcaaggccgacgctctgttcgaa
gtggccggcttctccgcccagcaggccgagacctatgtgatgcgctactttgagtgttcg
gggaccaccgagcaccaaaagagagccctggcgctcctccagtcccagccatttctcctg
agtcacagccatagccccactgtgtgccgggccgtgtgccagctcttggaggccctcctg
gagctaggtgatgaggcccagctgccttccacgctcacgggactctatgttggcttacta
ggcccaggagcccgtgacagccccccaggggccctggtgggactggccaggctggcctgg
gagctgggccgcggtcaccagagcagcctgcgggagggccagttcccatcggccgaggtg
agggtctgggctgtggcccaaggcttggtgcagcccaccccgggggccccggagaccaag
ctggccttctccagcttcctcctgcaatgcttcctgggcgccatgtggctggctctgagc
agcgaaatcaaggacaaggagctgccgcagtatttggcattgaccccgaggaagaagagg
ccctatgacaactggctggagggcgtgccgcgctttctggttgggctggtcttccagcct
cgtgcctgctgcctgggagccctggcagggctggcgggctccacctcagcggtcaggaag
caggaggtgctcaccaggtacctgaagcggctgcagcctggggcgctgaaggcggggcgg
ctgctggagctgctgcactgcgcccacgaggcgctggatgccgggctttggcagcatgtg
ctgcaggggctcccggcccacctctcgttcctgggcacccggctcacacctcccgacacc
tacgtgctgggcagcgccttggaggcggcgggccgagacttctccctggacctccgcagc
actggcgttgacccctctggactggggagcctcgtgggactcagctgtgtcacccatttc
agggctgccttgagtgacacagtggagctgtgggagtccctacagcagcatggggaggcc
aagttactccgagcagtgaaggagaagttcaccattgagcctttcaaggctgaatccatg
aaggatgtggaagacctgggcaacctcgtgcagatccagaggacaagaagttcctctgaa
gacacgcctggggaactccctgccatccgagacttaaagaagctggagtttgcgctgggc
cccatcttgggccctcaggcttttcccaaactggtgaagatccttgaggccttttcttcc
cttcagcatctggacctggactcactgagtgagaacaagatcggggatgagggtgtcgcc
cagctctcggccaccttccctcagctgaaggccctggagacgctcaatttgtcccagaac
aatatcactgacttgggtgcctgcaagctggcggaggccctgcccttgctggctgcgtcc
ctcctcaggctgagcttgtacaataactgcatctgcgatgtgggagctgagagcctggca
cacgtgcttccagacatggtgtccctccgggtgctggatgtccagtacaacaagttcaca
gctgccggggcccagcagctcactgccagcctgagaaagtgccctcacgtggagaagctg
gcgatgtggacgcccaccatcccttttggcgtccaggaacacctgcagcagctggactca
aggatcatcctgagatga
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