Globicephala melas (long-finned pilot whale): 132594512
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Entry
132594512 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03008
Ribosome biogenesis in eukaryotes
gmf03013
Nucleocytoplasmic transport
gmf03015
mRNA surveillance pathway
gmf05014
Amyotrophic lateral sclerosis
gmf05164
Influenza A
gmf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132594512
03015 mRNA surveillance pathway
132594512
03008 Ribosome biogenesis in eukaryotes
132594512
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
132594512
05168 Herpes simplex virus 1 infection
132594512
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132594512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
132594512
03009 Ribosome biogenesis [BR:
gmf03009
]
132594512
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132594512
mRNA cycle factors
Stress granule specific factors
132594512
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132594512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
132594512
NCBI-ProteinID:
XP_060148329
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All DBs
Position
X:40457283..40464104
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AA seq
498 aa
AA seq
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MHTTVWRNRKPLEREMGENTQDGTPGSWFRVTIPCGIKYDKTWLMKSIQSHCSVPFTPVD
LHFMQNGARFFVQEASTASALMDVSYKIRDKESRNVCIPVFVSPSAVPYSVRDKLKPEEM
EQLKLTLSKRFDVSQQALDLQRLRLDPDLVGYDIDIFLNRRSCMAATLQVIEKYFPELLS
LNLSSNKLYQLDGLSDIIQMAPTVKILNLSKNELTSVWELSKMQGLKLEELWLQGSPLCD
TFPDQSTYVRAIRECFPKLLRLDGQELPSPVTVDVDTPYVVKPCKGSYFGSDELKSLVLQ
FLKQYYLIHDYGDRQVLAGAYHEEACFSLTIPFHPEDPAPSSLCEYFKDSRNMKKLKDPY
LRVQLLKHTKRVIVHTLCVLPKTQHAFSSFVVDTWYQTERMLCFSVSGVFKEGEXSSQGC
VRAFTRTFIATPARYASLCIVNDELFVRDADPSETQSVFSIPLPTPTSSSXAPLSQQQQD
IMQASSTPSEMNLXWSQK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcatactactgtgtggagaaacagaaaacctctggagagggaaatgggggagaacaca
caagatggaaccccagggagctggttcagggtcacaattccttgtgggataaagtatgac
aagacatggctaatgaagtcaatccagagccattgcagtgtccccttcactccagtggac
ttgcactttatgcaaaatggggctcggttctttgtccaggaagctagcactgcctctgca
ttgatggatgtcagctacaagattcgtgacaaggagagccgaaacgtgtgtatacctgtc
tttgtcagcccctccgctgttccctactctgtgcgggataagttgaagccagaagaaatg
gagcagctaaagctgaccttgagcaaacgatttgatgtctcccagcaagctcttgacctc
cagaggctccgccttgacccagacttggtgggctatgatattgatatatttctgaatcga
agaagctgcatggctgccaccctgcaggtcatcgaaaagtatttccctgagctgttgtcc
ttgaacttgagcagcaacaaactgtaccagctggatggcctgtctgacattatacagatg
gcccccacggtcaagatcctgaacctctccaaaaatgagctgacgtctgtgtgggagttg
agcaagatgcaagggctgaagcttgaagagctgtggctgcaagggagcccattgtgtgac
accttcccagaccagtccacctatgtaagggccatcagagaatgtttcccgaagttgtta
cgcctggatggccaggagttaccgtcaccagtgaccgttgacgttgacactccctacgta
gtaaagccctgcaagggaagctactttggatctgatgagctgaagagcctagtcctgcaa
ttcctgaagcagtactacttgatccatgactatggagacagacaggttctcgcaggtgct
tatcacgaggaggcctgcttctccctgacgattcccttccaccccgaggacccagcccca
agcagcttgtgtgagtatttcaaggacagcaggaatatgaagaagctcaaggacccctac
ctgcgggtccagctgctgaagcacacaaaacgtgtcattgtgcacactctctgtgtgttg
cccaagactcagcatgccttcagctccttcgtggtggacacgtggtaccagacggaaagg
atgctctgcttctccgtcagcggggtgttcaaggaaggtgagtgaagttctcagggctgt
gtgcgtgccttcacccggaccttcattgctacccctgcccgctacgccagtctgtgcatc
gtgaatgacgagctgtttgtgagggatgccgaccccagtgagacccagagtgtgttctcc
atcccactgcctacacccacctccagctccnatgcacccctctcccagcagcagcaggac
atcatgcaggcatcctccaccccatctgagatgaacctctagtggtctcagaaatga
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