Gordonia mangrovi: NWF22_01935
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Entry
NWF22_01935 CDS
T08472
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NWF22_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmg03000
]
NWF22_01935
03400 DNA repair and recombination proteins [BR:
gmg03400
]
NWF22_01935
Enzymes [BR:
gmg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NWF22_01935
Transcription factors [BR:
gmg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NWF22_01935
DNA repair and recombination proteins [BR:
gmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NWF22_01935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HHH
TetR_N
Motif
Other DBs
NCBI-ProteinID:
UVF78659
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Position
402387..404060
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AA seq
557 aa
AA seq
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MTSTSTVASLLDFDSCYRAVSSRDARFDGQFFVAVHTTGIYCRPSCPARTPHRQNLHFVL
TAAAAQQQGFRACRRCAPDAVPGSPQWNTGADLSARAMRLIADGALEHGGVDELAARLGY
TPRHLTRVLTAELGAGPLALARAHRAGTARVLIQRTGMPMTDIAFAAGFRSVRQFNDTIR
DVFGLTPSRMRSLGAPTAAARPTSIGEVSLRLAHRQPLHLPWLRWFLGAHRVSGAEELTG
GVEPHNWRFSRTVDLPHGPALVTIEPASTHVNARLEHLDMRDLGVAVNRVRRLLDLDADP
FSTDEALCGDPVLAHLVRAAPGLRVPGTMDPAETLIRTMIGQQISMKAARHHVDRLTQAL
GRPAPWVRAADCDHSPPGGDDDAATRWLLFPTPAAIAAHGRSVLAGPKRRIDAIISTATA
VADGRIDMHPGRTAADLRAELLTLPGVGRWTADYVAMRVTGHPDVMLDQDLVVRRAAADL
GLDLADRQAGWSPWRSYASMHLWRARLSVSEPILADQMSDTPLSPRSSTRALSPRSRTSR
SIPSRPGHPVDTLQGAP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtgacatccacatccacggtggcgagcctgctggacttcgacagctgctatcgcgcggtc
tcctcgcgcgacgcccggttcgacggtcagttcttcgtcgctgtacacaccaccgggatc
tactgccgaccgtcgtgtccggcccggaccccgcaccgacagaacctgcacttcgtgttg
accgcagccgccgcccagcagcagggcttccgcgcctgccggcggtgcgcgcccgacgcg
gtcccgggctcaccgcagtggaacaccggtgccgacctgtctgcgcgggccatgcggctc
atcgccgacggggcgctcgagcacggcggcgtcgacgagctggccgctcgtctgggttac
acaccccggcacctcacgcgtgttctgaccgccgaactgggcgccggccccttggccctg
gcacgcgcccaccgggcgggaacagcgcgtgtgctcatccagcgcaccgggatgccgatg
accgacatcgccttcgccgccggctttcgcagcgtccggcagttcaacgacaccatccgc
gacgtgttcggcctcaccccctcgcgcatgcggtcactcggcgcacccaccgctgccgca
cgacccacctcgatcggcgaggtgtcgctgcggctcgcccatcggcagccgctgcacctg
ccctggctgcgctggtttctcggcgcccaccgcgtgtccggagccgaggagctgaccggt
ggcgtcgagccccacaactggcggttcagccgaaccgtcgaccttccccacggacccgcg
ctggtcaccatcgagccggcatccacgcatgtcaacgcgcgactcgagcatctcgacatg
cgcgatctcggggtcgcggtcaaccgtgtgcggcgactgctcgacctcgacgccgacccg
ttcagcacggacgaggccctgtgcggggatcccgttctggcccacctggtacgcgccgcg
ccgggattgcgtgtcccgggcacgatggaccccgccgagacgctcatccgaacgatgatc
ggccaacagatcagcatgaaggctgcccgccaccatgtggaccggctgacccaggcgctc
ggccggcccgcgccatgggtgagggcggcagactgcgaccactcgccaccgggcggggac
gacgacgcagcgaccaggtggctcctgttccccaccccggcggcgatcgccgcgcacggc
cgttccgtgctggcgggccccaagcgccgcatcgatgccatcatctcgacggccacggcc
gtggcggacggacgcatcgacatgcatccgggccgcaccgccgccgacctgagggccgaa
ttgctgacgctgcccggggtcggccgctggaccgccgactacgtggccatgcgcgtcacc
ggacatcccgacgtcatgctcgaccaggatctggtggtgcgtcgcgccgccgccgacctc
ggccttgacctcgccgaccggcaggccggctggtccccatggcggtcctacgcgtcgatg
cacctgtggcgcgcccgcttgtcggtgtccgagccgatactggctgaccagatgtcggac
actcccctgtcgccgagaagttccacgcgggccctttcaccgagatcgcggacctcgcga
tcgattccctcccgaccgggccacccggtcgacactctccaaggagcaccatga
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