Gordonia mangrovi: NWF22_10030
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Entry
NWF22_10030 CDS
T08472
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gmg
Gordonia mangrovi
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmg03032
]
NWF22_10030 (gyrB)
03400 DNA repair and recombination proteins [BR:
gmg03400
]
NWF22_10030 (gyrB)
Enzymes [BR:
gmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NWF22_10030 (gyrB)
DNA replication proteins [BR:
gmg03032
]
Prokaryotic type
DNA Topoisomerases
NWF22_10030 (gyrB)
DNA repair and recombination proteins [BR:
gmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NWF22_10030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UVF80130
LinkDB
All DBs
Position
complement(2191918..2193954)
Genome browser
AA seq
678 aa
AA seq
DB search
MADKGKSKKPGEYSADSISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMA
GHASKVEVTLLEDGGVQVVDDGRGIPTDMHKTGVPTVEVVMTQLHAGGKFDSDAYAVSGG
LHGVGISVVNALSTRVELEIDYGGFHWEQHYDHAKPSKLEKGDATRKTGTTVRFWPDADI
FETTTFSAETVARRLQEMAFLNKGLTITLTDNRLSDEAAVAEAEMDEDSAEAAETIKSEV
EKAQKAAKVRTRTYHYPDGLVDYIKHLNRTKNAIHTSVVGFTAKGTGHEVEIAMQWNAGY
SESVHTFANTINTHEGGTHEEGFRAALTSTVNKYAVDKKLLKEKDGKLTGDDIREGLAAV
ISVKVGDPQFEGQTKTKLGNTEVKSFVQKTCNEHLAHWFEANPAEAKIIIKKAVDSAQAR
MAARKARELVRRKTATDIGGLPGKLADCRSNDPTKCEVYIVEGDSAGGSAKSGRDSMYQA
ILPIRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDG
QHIATLLLTLLFRFMRPLIEHGHVYLAQPPLYKLKWQKTEPEFAYSDRERDGLLEAGRAA
GKKINTDDGIQRYKGLGEMNAKELWETTMDPAVRVLRQVTLDDAAAADELFSILMGEDVA
ARRSFIARNAKDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaaaggtaagtccaagaagccgggcgagtacagcgctgattcgatcagcatc
ctggaaggtctcgaggccgttcgcaagcggccgggtatgtacatcggttccaccggtgag
cggggtctgcaccacctgatctgggaggttgtcgacaactcggtcgacgaggccatggcc
ggccacgcctccaaggtggaggtcacgctgctcgaagacggtggtgtccaggtggtcgac
gacggccgcggcatcccgaccgacatgcacaagaccggtgtgccgaccgtcgaggtcgtg
atgacccagttgcacgccggcggcaagttcgactccgatgcgtatgcggtctccggtggt
ttgcacggtgtgggcatctcggtggtcaacgctctgtcgacccgtgtcgagctggagatc
gactacggcggtttccactgggaacagcactacgaccacgccaagcccagcaagctggaa
aagggtgatgccacccgcaagaccggcaccaccgtgcggttctggccggacgccgacatc
ttcgagaccaccacgttcagcgccgagacggtggcgcgacgcctgcaggagatggcgttc
ctgaacaagggactgaccatcacgctgaccgacaaccggctcagtgacgaggccgcggtg
gccgaggccgagatggacgaggacagcgccgaggccgcggagaccatcaagtccgaggtg
gagaaggcgcagaaggctgccaaggtgcgcacccgcacctatcactaccccgatggcctg
gtggactacatcaagcatctgaaccggacgaagaacgccatccacacctcggtggtcggc
ttcaccgccaagggcaccggccatgaggtggagatcgcgatgcagtggaatgccggctac
tccgagtcggtgcacaccttcgccaacaccatcaacacccacgagggcggtacgcacgaa
gagggcttccgcgcggcgttgaccagcaccgtcaacaagtacgcggtcgacaagaagctc
ctcaaggagaaggacggcaagctcaccggtgacgacatccgggagggactggccgcggtc
atctcggtgaaggtcggcgatccgcagttcgagggtcagaccaagaccaaactcggcaac
accgaggtcaagagtttcgtgcagaagacctgcaacgagcacctcgcgcactggttcgag
gccaacccggccgaggcgaagatcatcatcaagaaggcggtggactccgcgcaggcgcgg
atggctgcccgcaaggcccgagaactggtgcggcgcaagaccgcgacggatatcggcgga
ctgcccggcaagctcgccgactgccgcagcaacgaccccaccaagtgtgaggtctacatc
gtggagggcgactccgccggtggtagtgccaagtcgggtcgcgactcgatgtatcaggcg
atcctgccgatccgcggcaagatcatcaacgtcgagaaggcacgcatcgatcgagtcctc
aagaacaccgaggtccagtcgatcatcaccgccttcggtaccggtatccacgacgagttc
gacatcgccaagctgcgctatcacaagatcgtgctgatggccgacgccgacgtcgacggc
cagcacatcgcgaccctgctgctgacgctgctgttccggttcatgcgtccgctgatcgag
cacggccacgtctacttggcgcagccgccgctgtacaaactgaaatggcagaagaccgaa
cccgaattcgcctactccgaccgggaacgcgacggcctgctcgaggccggccgcgccgcg
ggcaagaagatcaacaccgacgacggcatccagcgctacaagggtctcggcgagatgaac
gccaaggaactgtgggagaccaccatggatcccgcggtccgtgtgctgcgccaggtgacc
ctcgacgatgccgccgccgccgacgaactgttctcgatcctgatgggtgaggacgtggcc
gcccgccgcagcttcatcgcccgcaacgccaaagacgttcgcttcctggacgtctga
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