KEGG   Gordonia mangrovi: NWF22_19150
Entry
NWF22_19150       CDS       T08472                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gmg  Gordonia mangrovi
Brite
KEGG Orthology (KO) [BR:gmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmg03400]
    NWF22_19150
Enzymes [BR:gmg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NWF22_19150
    5.6.2.6  RNA 3'-5' helicase
     NWF22_19150
DNA repair and recombination proteins [BR:gmg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NWF22_19150
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr WHD_2nd_Lhr DEAD WHD_4th_Lhr Helicase_C ResIII AlkZ-like AAA_22 AAA_25 DUF6406 PhoH
Other DBs
NCBI-ProteinID: UVF77388
LinkDB
Position
complement(4208860..4213500)
AA seq 1546 aa
MPRKASVLDRFTAGTRRWFDGAFEQPTAAQTGAWASIADGNNTLVIAPTGSGKTLSAFLW
ALDRLAARPDRTRGTRVVYISPLKALAVDVERNLRAPLTGITRAAQELDEPEPAITVGVR
SGDTPAAQRRALVKSPPDILITTPESLYLMLTSAARETLTDVEVVIVDEVHAVAATKRGT
HLALTLERLDELLDRPAQRVGLSATVRPPEVVAEFLSGSAPCRVVRPKAAKTFDLRVDVP
VEDMANIPPPPDAPGGEELDDAFSPTAGSLWPHVESSIVDLIEKNRATIVFANSRRLAER
LTARLNEIHADRTGTGATATRNPTVAGGAPAHIMASGASGGAEPILARAHHGSVSKEQRA
QIEDDLKAGRLPCVVATSSLELGIDMGAVDLVVQVEAPPSVAGGLQRIGRAGHQVGEISQ
GVLYPKHRTDLIHCTVTVERMLDGAIEELRVPQNPLDILAQQTIAAAAVDDLDVDRWFEV
VRRAAPYRELGRQVFEATLDLIAGRFPSDEFAELRPRVIWDRDAGTLVGRRGAQRLAVTS
GGSIPDRGLFGVFMVGEKSTRVGELDEEMVYESRVGDVFALGATSWRIEDITHDRVLVSP
AYGQPGRLPFWIGDTIGRPAELGAAIGKFTGAVADPDTLADHARRLGLTDNARLNLAALV
AEQQEATGHLPTDRTLVVERFRDELGDWRLILHSPYGLRVHAPWASAISARLLQTLGLEG
ATTASDDGIIVRLPDTDDDPPGASVFVVDPDEIEQLVTDALADSSMFASRFRECAARALL
LPKRDPGRRAPLWQQRQRSAQLLSVASRFPDFPIILETVRECLQDVYDLPALTDLLTRIR
QRRVRVVETETASPSPFAASMLFGYVGAFLYADDAPLAERRAAALSLDTSLLAQLLGRVD
LRELLDPGVIAEVVARLQRTAPERHARDAEDIVDLLRWLGPLETGAVDARYRGEVPALDH
LTELHRTGQIISVTHRGHPLWASVDDTARLRDGLGVPAPPGIPATYLEPVPDPVGDLVHR
YARTHGPFTVLDAAEALGMAVGVIRDTLVRLAADRRVIEGDFLPEGHGTDHTAAEMPTGA
PRTTQWCHADVLGQIRRGSLAASRAEIAPVDHETLTRFTASWQHVTPDEQLRGVDGVATV
IDQLAGYPLPASAWESLILPARVADYSPAMLDELLSAGEVIWSGHGRIGGSDGWIALHPS
DVAPLTLAPADDIDTTGLHEGLTAALAPGGALRFGKLTELVGADVTVSAADIEAALWDLV
WAGRVSNDSFAPVRALLAPRRSSSSPRSTPAHRARGRAPRLRAQRLSTRYLAEHGATQNV
SSTAGGRWVVPDRIDADPTVATQALCDQLLARYGVITRGSVVAEDIDGGFARIYKALNVF
EDNGQVRRGYFVEGLGGAQFASTATIDELRHHALDDRRTPPGIVLAATDPANPFGAALGW
PATRAEDRGHRPGRKPGAVVVLVGGELVVYVERGGKTILTFTESSAALQAAAGALAELVR
SGRVARLMIDQVDSQPVLTSEFGRILIEAGFATTPRGVRMRYGRHA
NT seq 4641 nt   +upstreamnt  +downstreamnt
gtgccacgcaaggcttccgtcctcgaccgcttcaccgccggaacccggcggtggttcgac
ggtgcgttcgaacaaccgactgcggcgcagaccggcgcgtgggcctcgattgccgacggc
aacaacacgctggtcatcgcaccgacggggtccggtaagaccctgtcggctttcctctgg
gcgctcgatcggctcgccgcccggccggaccggacacgcgggacgcgggtcgtctacatc
tccccgctgaaggcgctcgcggtcgacgtcgaacgcaacctgcgcgccccgctgaccggc
atcacccgtgccgcccaagagctcgacgaaccggaaccggcgatcaccgtcggcgtgcgt
tccggtgacaccccggccgcccagcgccgcgccctggtcaagtcgccccccgacatcctg
atcaccacccccgagtcgctgtatctgatgctcacctcggccgcacgggagacgctgacc
gacgtcgaggtggtgatcgtcgacgaggtccacgccgtcgcggcgaccaagcgcggaacc
catctggcgctcacgctggaacgactcgacgaactcctcgatcggccggcgcagcgcgtc
ggcctgtcggcaaccgtgcggccgccggaggtcgtggccgagttcctcagcggaagcgcg
ccgtgcagggtggttcgccccaaggcggccaagaccttcgatctgcgggtggatgtgccc
gtcgaggatatggccaacatcccaccgccgcccgatgcgcccggtggcgaggagctcgac
gacgccttctcccccaccgccgggtcgctgtggccccatgtggagtcgtccatcgtggac
ctcatcgagaagaaccgcgcgaccatcgtgttcgccaactcgcggcgactggccgaacga
ctcaccgcacgcctcaacgagatccacgccgaccgcaccggcaccggggcgaccgccacc
cgcaatcccacggtcgccggcggggctcccgcccacatcatggccagcggcgccagcggc
ggcgccgagccgatcctcgcacgcgcccatcacggttcggtcagcaaggagcagcgcgca
cagatcgaggacgacctcaaggccggtcgcctgccgtgtgtggtggcgaccagttcgctg
gaactcggcatcgacatgggcgcagtggatctcgtggtgcaggtcgaggcgccgccgtcg
gtggccggcggactccaacgcatcggccgtgccgggcatcaggtcggcgagatctcgcag
ggtgtgctctacccgaaacaccgcaccgacctgatccactgcacggtcaccgtggaacgg
atgctcgacggtgccatcgaagaactccgggtaccccagaacccactcgacatcctcgct
cagcagaccatcgcggccgccgccgtggacgacctcgacgtggaccggtggttcgaggtg
gtccgccgcgccgcgccgtatcgcgagctcgggcggcaggtgttcgaggccaccctggac
ctgatcgccggtcgattcccgtccgatgaattcgccgaactgcgtccgcgggtcatctgg
gaccgcgacgccgggaccctggtcgggcgccgcggagcgcaacggttggcggtcacctcc
ggcggctcgatccccgatcgaggtctgttcggcgtattcatggtcggcgagaaatcgacc
cgggtcggcgagttggacgaggagatggtctacgagtcccgcgtcggcgatgtcttcgcc
ctcggtgccaccagctggcgcatcgaggacatcacccacgaccgggtgctggtgtccccg
gcctacggccagcccggtcgtctgccgttctggatcggcgacaccatcggacgccccgcc
gaactcggcgcggcaatcggcaagttcaccggcgcggtcgccgatcccgacacgctggcc
gaccatgcgcgccggctcgggctcaccgacaacgcccggctcaacctggccgccctcgtc
gccgagcaacaggaggccaccggccacctccccaccgaccgcaccctggtggtggagcgg
ttccgcgacgaactcggcgactggcgcctgatcctgcactcgccctacgggttgcgggta
cacgcaccatgggccagtgcgatctcggctcggctgttgcagacactcggcctcgaaggg
gcgaccactgcctccgacgacggcatcatcgtccgcctgccggacaccgacgacgacccg
cccggcgcatcggtcttcgtcgtcgaccccgatgagatcgaacaactggtcaccgacgcc
ctcgccgactcgtcgatgttcgcctcgcgattccgcgagtgcgcggcgcgagccctgctg
ctgcccaaacgcgatccaggccgtcgagcgccgctgtggcagcaacgccagcgcagcgcg
cagctgctgtcggtcgcgtcgagatttcccgacttcccgatcatcctggagacggtgcgg
gagtgtctgcaggacgtctacgacctgccggccctcaccgatctgctgacccgtatccgg
cagcggcgggtccgcgtcgtcgagaccgagaccgcgagtccgtcaccgttcgccgcgtcg
atgctgttcggctacgtcggcgcgttcctgtacgccgacgacgccccgctggccgaacgc
cgcgccgccgcactgtccctggacaccagcctgctcgcccaactactcgggcgggtcgat
ctgcgcgaactgctcgaccccggcgtgatcgccgaggtggtcgcacgactgcaacggacc
gcacccgaacgacacgcccgcgacgcagaggacatcgtcgacctgttgcgctggctcggt
cccctcgagaccggtgcggtcgacgcacgctaccgcggcgaggtgcccgcgctcgatcac
ctcaccgaactgcaccgcaccggtcagatcatctccgtcacccaccgtggtcaccccctg
tgggcctcggtcgacgacaccgcccggctgcgcgacggcctcggtgtgcccgccccgccg
ggtatcccggcgacctacctggaaccggtgccggatccggtgggagatctggtgcaccgg
tacgcacgtacgcacggtccgttcacggtcctcgacgcggccgaagcgctgggtatggcg
gtcggggtcatccgcgacacgctggtcagactcgctgccgaccgccgggtcatcgaaggg
gacttcctgcccgagggccatgggaccgaccacaccgccgcggagatgcccaccggcgca
ccgcggacgacccagtggtgccacgccgatgtactcggccagatccgccgcggttcgctg
gccgcgagccgtgccgagatcgcgccggtcgaccatgagaccctcacccggttcaccgca
tcctggcagcacgtgacacccgacgaacaactccgcggcgtcgacggcgtcgcgacggtc
atcgaccagttggccggctacccactgcccgcctccgcctgggaatccctgatactgccg
gcccgtgtcgccgactacagcccggcgatgctcgacgagctgctcagcgcgggcgaggtc
atctggtccgggcacggccggatcggcgggtcggacgggtggatcgccctgcacccgtcc
gatgtcgcaccgctgaccctggcgcccgccgacgacatcgacaccaccgggctacacgag
ggactcaccgcggcgctggcgcccggcggcgcgctgcgtttcggcaagctcaccgaactg
gtcggggccgacgtcaccgtctcggccgccgacatcgaggcagcactctgggatctggtc
tgggcgggccgggtcagcaatgactcgttcgcgccggtgcgggcactactcgcaccgcga
cgctcgtcgtcatccccgcgatcgacacccgcccatcgggcgcggggacgggctccgcgc
ctacgcgcgcaacgactttcgacccgctatctcgccgagcacggtgcgactcagaacgtt
tcatccaccgccggcgggcgatgggtggtgcccgaccgcatcgacgccgaccccacggtc
gccacccaggcactgtgcgaccagttgctcgcacgctacggggtcatcacccgcggcagt
gtcgtcgccgaggacatcgacggcgggttcgcccggatctacaaggccctcaacgtgttc
gaggacaacggtcaggtgcgtcggggttacttcgtggaaggcctcggcggcgcacagttc
gcctcgacggcgacgatcgacgaattgcgtcaccacgccctcgacgatcgccgcaccccg
ccggggatcgtgctggcggccaccgatccggccaacccgttcggcgccgcgctgggctgg
ccggcaacccgcgccgaggaccgcggccaccggcccggtcgcaaaccgggcgccgtggtc
gtcctggtgggcggcgaactcgtggtgtatgtcgaacgaggcgggaaaacgatcctcacg
ttcacggaatcgtcagcggcactacaggccgcggcgggcgccctcgccgagctcgtcagg
tcgggccgcgtggcgcggctgatgatcgatcaggtcgactcccagcctgtgttgacctcg
gaattcggccgaatcctgatcgaggccggattcgcgaccacacctcgcggggtccggatg
cgctacggccggcatgcctga

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