Gordonia mangrovi: NWF22_20870
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Entry
NWF22_20870 CDS
T08472
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gmg
Gordonia mangrovi
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmg03016
]
NWF22_20870 (truB)
Enzymes [BR:
gmg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NWF22_20870 (truB)
Transfer RNA biogenesis [BR:
gmg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NWF22_20870 (truB)
Prokaryotic type
NWF22_20870 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
McpB_HAMP_2
Methyltransf_8
Motif
Other DBs
NCBI-ProteinID:
UVF77692
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All DBs
Position
4598322..4599224
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AA seq
300 aa
AA seq
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MADASIENAGLIIVDKDAGMTSHDVVSRCRKLFNTRRVGHAGTLDPMATGVLVVGIERAT
KLLGLLSLTTKSYVATIRLGAATDTDDREGQVISRADAAHLGDDEIVAGVAALTGDIEQV
PARVSAIKVDGRRAHALARTGAEFDLAARPVTVSRFDIAAIRRTDDGWVDVVVAVDCSAG
TYIRSLARDLGSALQVGGHLTTLRRTAVGPFTLEHARTLEALREQPGLSLTIDDAAKLSF
PHRDIDADEAESISQGRWLTPIGRKETYVVIDPDGRAIALVQEKGRRASSVMVVRPATLR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcatcgatcgagaacgcaggcctgatcatcgtcgacaaggacgccgggatg
accagccacgacgtcgtgtcgagatgtcgaaagctgttcaacaccaggcgagtcgggcac
gccggcacactggacccgatggccaccggggtgctggtggtgggtatcgagcgcgccacc
aagctgctcggactgctgtcgttgaccaccaagtcctatgtggcgacgatccggctcggc
gcggccaccgacaccgacgaccgtgagggccaggtcatctcgcgggccgatgcggcacat
ctcggtgacgacgagatcgtcgccggcgtggcggcgttgaccggcgacatcgagcaggtc
ccggcccgggtcagtgcgatcaaggtcgatggtcggcgcgcccacgccctggcacgtacc
ggcgccgaattcgacctcgcggcacggccggtgacggtcagccgcttcgacatcgcggcc
atccgacgcaccgatgacgggtgggtcgacgtggtcgtggcggtcgattgttcggccggc
acctacatccgttcgctcgctcgcgatctcggctctgcgctgcaggtcggcggtcatctg
actacgctgcgccgcacagccgtcgggccgttcacgctcgagcatgcccgcacactggag
gcgttgcgcgagcagcccggtctgtcgctgaccatcgacgacgcggcaaaactgtcgttc
ccgcaccgcgacatcgacgccgacgaagcggagtcgatcagccaggggagatggctgacc
ccgatcggccggaaagagacctatgtggtgatcgatcccgacgggcgggccatcgcactc
gtgcaggagaagggtcgccgcgccagctcggtgatggtggtgcggccggccaccctgcgc
tga
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