Gordonia mangrovi: NWF22_21150
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Entry
NWF22_21150 CDS
T08472
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg00300
Lysine biosynthesis
gmg00470
D-Amino acid metabolism
gmg01100
Metabolic pathways
gmg01110
Biosynthesis of secondary metabolites
gmg01120
Microbial metabolism in diverse environments
gmg01230
Biosynthesis of amino acids
Module
gmg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NWF22_21150 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NWF22_21150 (dapF)
Enzymes [BR:
gmg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NWF22_21150 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UVF77740
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Position
4655896..4656837
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AA seq
313 aa
AA seq
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MTATTSGDSALSDEKAFALHFVKGHGTQNDFVILTDPAAHLDLTRSRVAALCDRQRGIGA
DGLLRVVRSAALVERGVLDTLPTGVAPDDWFMDYRNADGSIAEMCGNGVRVFAHHLRASG
LMAADRFTVGSRAGARPVVVHDHDAVHADVTVQMGPVRRDGDSLVRIGDDVYRGVMVDVG
NPHLACVVPDLTAADLAAIDFSAGVRLEAEAFPHGANVEIVTTPGTPDAQGRFPASMRVF
ERGVGETRSCGTGLVAAGAALLAHRGESEGTLCITVPGGRVEVGIRADGSHLRGPSMLVA
EGRLRAGWDRPER
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccacaacatcgggcgacagcgcgctctccgacgagaaggcattcgccctgcat
ttcgtgaagggccacggcacccagaacgacttcgtgatcctgaccgacccggcggcgcac
ctcgacctgacccgctcacgtgtggcggcgttgtgcgaccggcagcgggggataggcgcg
gacgggctgctgcgggtcgtgcggtcggccgcgctggtggaacgcggagttctcgacaca
ttgcccaccggtgtcgcacccgacgattggttcatggactatcgcaacgccgacgggtcc
attgcggagatgtgtggcaacggagtgcgggtcttcgctcatcacctgcgggcctcgggt
ctgatggcggccgaccgattcaccgtgggttcgcgcgccggcgcccggccggtcgtggtc
cacgaccacgacgccgtgcacgccgacgtcaccgtgcagatggggccggtccgacgcgac
ggcgactcgctggtgcgcatcggcgacgacgtgtaccgcggggtgatggtcgatgtcggc
aacccgcatctggcatgtgtcgtaccggacctgaccgcggccgacctggcggcgatcgac
ttctccgccggggtacggctcgaggccgaggcgttcccccacggcgcgaatgtcgagatc
gtgaccacccccgggacaccggacgcccagggccggttcccggcgtcgatgcgggtcttc
gaacgtggcgtcggagagacccgtagctgcggaaccggcctggtggccgccggggccgcc
ctcctggcgcaccgcggcgagagcgagggcacgctgtgcatcacggtgccgggaggtcgg
gtggaggtgggtatccgggccgatggttcccacttgcgtgggccgtcgatgctggtggcc
gaagggcggttgcgagcgggctgggaccgtcccgagcgctga
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