Gordonia mangrovi: NWF22_21610
Help
Entry
NWF22_21610 CDS
T08472
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg00750
Vitamin B6 metabolism
gmg01100
Metabolic pathways
gmg01240
Biosynthesis of cofactors
Module
gmg_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
NWF22_21610 (pdxS)
Enzymes [BR:
gmg01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
NWF22_21610 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
NanE
IGPS
Glu_synthase
FMN_dh
DHO_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
UVF80876
LinkDB
All DBs
Position
4755128..4755976
Genome browser
AA seq
282 aa
AA seq
DB search
MAEMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIIS
AVSIPVMAKARIGHFVEAQVLQSLGVDYVDESEVLTPADYANHIDKWAFTVPFVCGATNL
GEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRDEIRRLTSLPTDELYVAAKELQAP
YDLVAEVAQAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPAQRAAAIV
QATTFHDDPDVLAKVSRGLGEAMVGINVDDIPQPHRLAERGW
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgctcaagggtggcgtcatcatggacgtggtcaccccggaccaggccaag
atcgccgaggatgccggcgcggtggcggtgatggcgctcgagcgtgtgccggccgatatc
cgcgcgcagggcggtgtctcgcggatgagcgatcccgacatgatcgacgggatcatctcg
gcggtgtcgatcccggtgatggccaaggcccggatcgggcacttcgtcgaggcgcaggtg
ttgcagagcctcggcgtggactacgtcgacgagtccgaggtgctgactccggccgactac
gccaaccacatcgacaagtgggcgttcaccgtgccgttcgtgtgcggcgccaccaacctc
ggtgaggcgctgcgccggatcaccgagggggcggcgatgatccgctccaagggcgaggcc
ggcaccggtgacgtctcgaacgcgaccacgcacatgcgcaagatccgcgacgagatccgc
cgactgacctcgctgccgaccgacgaactgtatgtggcggccaaagaactgcaggcaccc
tatgacctggtggccgaggtcgcgcaggccggcaagctgccggtcacactgttcaccgcc
ggtggtatcgccaccccggccgatgcggcgatgatgatgcagctcggtgccgaaggtgtg
ttcgtcgggtcgggcatcttcaagtccggcaacccggctcagcgggcggcggcgatcgta
caggccaccaccttccacgacgatcccgacgtgctggccaaggtgtcgcgcggactcggt
gaggcgatggtcggcatcaacgtcgatgacattccgcagccgcaccgcctcgccgaacga
ggttggtag
DBGET
integrated database retrieval system
