Gordonia mangrovi: NWF22_22375
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Entry
NWF22_22375 CDS
T08472
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
gmg
Gordonia mangrovi
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gmg03051
]
NWF22_22375 (pafA)
Enzymes [BR:
gmg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NWF22_22375 (pafA)
Proteasome [BR:
gmg03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NWF22_22375 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UVF77950
LinkDB
All DBs
Position
4930003..4931361
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDSLIQLINHDRAGELVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSEMTTLLKVGSAALVLEMIEAGVVF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHMANRRPDPEMD
QVVDLWGRMLDAVESGDFSGVDTEVDWVIKRKLFQRYQDRYSMDLSDPKIAQLDLAFHDI
KRGRGVFDVMLRKGLVARATTDEAIKTAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgaatcatgggtatcgagaccgaattcggtgtcacgtgtaccttccatggc
catcgccgactgagcccggacgaggtcgcccgatatctgttccgccgggtggtctcgtgg
ggcaggtcgtcgaacgtcttcctgcagaacggcgcgcggctgtatctcgacgtcggatcg
cacccggagtacgcgaccgccgaatgtgacagcctcatccagctgatcaatcacgatcga
gccggcgagttggtcctcgaggacctgctcgtcgatgccgagcagcgcctggccgacgag
gggatcggcggcgacatctacctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactatctcgtggtgcgcgccggcgagttctcccggatctccgacgtg
ctgctcccgttcctggtgacccggcagctgatctgcggcgcgggcaaggtcttgcagacc
ccgaaggcggccacgttctgtctgtcgcagcgtgccgagcacatctgggaaggagtgtcg
tcggcgaccacccgctcgcggccgatcatcaacacccgcgacgaaccgcatgccgacgcc
gagaagtaccgccgtctgcacgtcatcgtcggcgactcgaacatgtcggagatgacgacc
ctgctcaaggtcggctcggcggcgctggtgctcgagatgatcgaggccggcgtggtgttc
cgcgacttcgcactcgacaacccgatccgggccatccgtgaggtcagccacgatccgacc
gggcgtcggcccgttcggctggccggtggtcggcaggccagcgcgttggacatccaacgc
gagtaccacgcgcgggcggtcgagcacatggccaaccgccgccctgaccccgagatggat
caggtcgtggatctatggggacggatgctcgacgcggtggagagcggcgacttctccggg
gtggacaccgaggtcgactgggtgatcaagcgcaagctgttccagcgctatcaggatcgg
tactcgatggacctgtcggacccgaagatcgcgcaactcgacctcgctttccacgacatc
aagcgcgggcggggcgtattcgacgtcatgctgcgcaaggggctcgtcgcgcgcgcgacc
accgacgaggcgatcaagacggcggtcaacgagccgccgcagaccacccgcgccaagctc
cgcggcgacttcatctcggccgcgcagaaggcgggccgcgatttcaccgtggactgggtt
cacctcaagctcaacgaccaggcgcagcgcaccgtcttgtgcaaggacccgttccgcagc
gtcgatgagcgagtcgatcggctgatcgcgtccatgtga
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