Gordonia mangrovi: NWF22_22400
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Entry
NWF22_22400 CDS
T08472
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
gmg
Gordonia mangrovi
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmg03019
]
NWF22_22400
Enzymes [BR:
gmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NWF22_22400
Messenger RNA biogenesis [BR:
gmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NWF22_22400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
UVF77955
LinkDB
All DBs
Position
4934725..4937583
Genome browser
AA seq
952 aa
AA seq
DB search
MTRFDEFTGRLAFALDEFQRRACVALEAGHGVLVCAPTGAGKTIVGEFAVHLALTSGTKC
FYTTPIKALSNQKYADLVAVHGADSVGLLTGDNSINPDAPVVVMTTEVVRNMIYANSRAL
DGLSYVVMDEVHFLADRFRGAVWEEVILHLEPSVRVVSLSATVSNAEEFGDWIQAVRGDT
TVIVDEHRPVPLSQHMLVGSRMFDLFDPAHRTVTPRPEAGQRRRPEVNPELKRYIRHRIL
LSDDSDARARGGGRRGGGPRAHRRGGARPPSRPELVSRLDREGLLPAIGFIFSRVGCDAA
LAQCLRSGIHLLTPDEAVTVDAVVDRHLAELSPADEEILGVEEWRAGLRRGFAAHHAGLL
PTFRHAVEELFVHGLVKMVFATETLALGINMPARTVVLERLVKFNGEAHVDLTPGEFTQL
TGRAGRRGIDVEGHAVVVWTPDTVPDQVAGLAGARTFPLRSSFQPEYNMAVNLLGRLGLD
GSRELLNRSFAQFQADRSVVGQARKVDDAQRRLRKLDVELIRAAENRGLEPGGILDDDTP
AATERPDDSGARGAPSYEGFLGYVQLREDIRRRERDLKFERRAANNESTVADLAALKRGH
VIGLHGGRHRGIAVVLEPAAQSVDPKPLVLAQDAWCGRVGTRDFVNPPQVLGNMRLPKHA
DRRTGRGRRDLASALRSTGIEMPRGRSKKRAAAADDRELGRLRSALRAHPAHRLDGSDEL
FRLAERRNRVVREIVSAERVIADRTSTLGVQFDRIVAVLAELGYVEVAADRSGAEQVTVT
ASGALLSRIYSESDLLVIECIRAGVWDGLAPHELAAVVAAMVFETRRESFAAVDAMPGNA
ALRGALADTIDIWRDLTIVESRHRVDATREPDTGFSVAVSLWASGRTLTESLAAAGERGQ
LLSPGDFVRWNRQVVDLLEQIRLCVGPGTRLADSARAAVAGIRRGVVAAELA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgattcgacgagttcaccggtcggctggcattcgccctcgatgagttccagcgt
cgggcctgtgtcgcgctcgaagccggccacggcgtgctggtgtgcgcgccgaccggcgcc
ggtaagaccatcgtcggcgagttcgcggtccatctcgcgctgacgtcgggaacgaagtgc
ttctacacgactccgatcaaggcgttgtccaatcagaagtacgccgatctcgtcgccgtg
cacggagccgactccgtcggactgctcaccggtgacaactccatcaatccggacgcaccc
gtcgtcgtgatgaccaccgaggtcgtgcggaacatgatctatgcgaactcgcgggcgctc
gacgggctgtcctacgtggtcatggacgaggtgcactttctggccgaccgattccgcggc
gcggtctgggaagaggtgatcctgcatctcgagccgtcggtgcgggtggtgagtttgtcg
gccacggtgagcaacgccgaggagttcggcgactggatacaggcggtgcgcggtgacacc
accgtcatcgtcgacgagcatcgaccggtgccgctgtcgcagcacatgttggtcggttcc
cggatgttcgatctgttcgacccggcgcaccgcaccgtcacgccccggcccgaagccggg
cagcggcgccgtcccgaggtcaatcccgagctcaaacgctatatccgacatcgcatcctg
ctgtccgacgacagtgacgcacgcgctcggggcggtgggcgtcgcggtggtggaccgcgc
gcgcaccggcggggtggcgcccggccgccgtcgcggccggaactcgtgtcgcgactcgac
cgcgaagggctgttgccggcgatcgggttcatcttctcccgggtgggatgcgacgccgcg
ctggcccaatgcctgcggtccggcatccacctgttgacccccgacgaggcggtgacagtg
gatgcggtcgtcgatcgtcacctcgcggaactgtcgcccgccgacgaggagatcctcggt
gtcgaggaatggcgcgccggtctgcgccgcggtttcgccgcgcaccacgccggtctgcta
ccgacgtttcggcatgcggtcgaagagctcttcgtgcacgggctggtcaagatggtgttc
gctaccgagaccctggcactgggcatcaacatgccggcccgcacggtggtcctcgaacgg
ctggtgaagttcaacggcgaggcccatgtcgacctcacccccggagaattcacccagctg
accggtcgagccggccgccgcggcatcgacgtcgaaggacacgcggtggtggtgtggaca
ccggatacggttccggatcaggtcgccgggctcgccggcgcccggacgttcccgttgcgt
agctcattccagccggaatacaacatggccgtgaatctgctcggtcggctcgggctcgac
ggttcgcgtgaactgctgaaccggtcgttcgcccagttccaggccgaccggtcagtggtg
ggacaggcccgcaaggtcgatgacgcgcagcggcggctgcgcaaactcgatgtcgaactg
atccgtgccgcggagaaccgcggcctcgaaccgggcgggattctcgacgacgacacgccc
gctgccacagaacgtcccgacgacagcggcgcgcgcggcgcaccttcctacgaggggttc
ctcgggtatgtgcaacttcgcgaggacatccggcgccgcgaacgggacctcaagttcgag
cggcgggccgcgaacaacgagtcgaccgtcgccgacctggccgccctcaaacggggacat
gtgatcggactgcacggcggcagacaccgaggtatcgccgtggtcctcgaaccggccgcc
cagtcggtcgatcccaagccgctcgtgctcgcacaggacgcctggtgtggccgtgtcggc
acccgtgacttcgtcaacccgccgcaggtgttgggcaacatgcgcctgcccaaacacgcc
gaccgccgcaccggccggggtcgtcgggacctggcgtcggcgctgcggtccaccgggatc
gagatgccgcggggtcggtccaagaagcgtgccgccgccgccgacgaccgcgaactcggc
agacttcgttcggcgctgcgggcccatccggcacaccgactcgacggctcggacgaactg
ttccggctggccgaacgacggaaccgggtggtgcgtgagatcgtttcggccgaacgggtc
attgccgatcggacctccaccctcggcgtgcagttcgaccgcatcgtcgccgtcctggcc
gaactcggatacgtggaggtcgcggccgaccggtccggggccgaacaggtgacggtcacc
gcctccggtgcactgctcagcaggatctacagcgagagcgatctgttggtgatcgagtgc
atccgagccggggtgtgggacgggttggcgccgcacgagctcgcggccgtggtcgccgcg
atggtgttcgagacccgtcgggagagcttcgccgctgtggacgcgatgccggggaacgcc
gcgctgcgtggtgcgctggcagacacgatcgacatctggcgggatctgaccatcgtcgaa
tcacgtcatcgggtcgacgcgacgcgtgagcccgacaccggtttctcggtcgcggtctcg
ttgtgggcctcggggcgcaccctgaccgaatcgctcgccgcggccggtgagcgagggcag
ctgctgtcgccgggagatttcgtgcggtggaaccggcaggtggtggacctgctcgaacaa
atccgtctgtgcgtcggtccgggaactcgtcttgccgattccgcgcgtgccgccgtcgcc
ggtatccgtcgcggggtggtggcagccgaactcgcttga
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