Gordonia mangrovi: NWF22_23305
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Entry
NWF22_23305 CDS
T08472
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NWF22_23305 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmg03400
]
NWF22_23305 (recC)
Enzymes [BR:
gmg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NWF22_23305 (recC)
DNA repair and recombination proteins [BR:
gmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NWF22_23305 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UVF78112
LinkDB
All DBs
Position
complement(5134583..5137987)
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AA seq
1134 aa
AA seq
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MFHLHRAERTDVLADALAQLLAIPLPDPMTTEIVSVPAPGVERWLQQRLATRLGTSRGRD
GVAANLDFTSPALLTDQILQSAERFVDGEGARVPAAQRWRPAAMTWPVLRVLDDLIDDPR
LAVLARHVGADASAEDHRRGRRYATARQIADLFDSYGRQRPAMLAAWAAGTDTDGVGAPV
PADLAWQPDVWRAVRREIGHPHPAERLAEHCAALREHPNATDLPERLSVFGPTRVTESLL
AVLVAVSAHRDVHLFVPHPSPALWQILAPIAAVGTADGRRRADNPPPPLAHPLLAGLSHD
VQELQRRVAPIVDHDVHHPLPGAADHDGVLAALQAGLRDDMPAPALRDADTSVEVHACHG
AERQVEVLRDRLLHLFAADPTLQPRDVLIMCPDVEVFAPLVRGAFGQPGLGHPAFELRVR
LADRGLRHTNSVLDVIAAVVELAAGRVTAGAVVDLLGRDPVRRRFDLTDDDLEVIREWLV
GSNIRWAIDDAQRARFGLAGFRQGTFETGIDRILLGAVAEETDNEWLDTALPLGGVESTE
IDLAGRFAEFVDRLSTTLNALTGTQSADAWTQVITDAVDALVRTEADSEWQRAQALRAVA
GAFDDGAVDAGGSDAPPVDLRLGDIRDLIAGLVSAAPTRANFRTGELTVCSMVPMRSVPH
RVIVLLGVDGDAFPRALRHDGDDVLARAPLLGERNPRDEDRQLFLDAICAAEEHVLVFYS
GADPVSGQRIPPAVVVSELVDAVSAITGVPDGCVRRHTLHAFDADNFTPGAIPGVAGPFS
YDIALLAGARASGTTPDRRPLIADIRLDPPAPDDIELASLIGFLTNPIEGFVRQRLGARI
PDEELPHADQLDVALAPLDRWAIGDRFLSRMLAGTDLTACQAAERRRGTLPPYAFGTREL
QDISADVASVFAAAESARMGAPATVDVVVPLPDGRRLYGTVGDVYAGTVVTASYSKLRAK
QRLTAWIRLLAVAADRQAAGRGDDIHAAAVIARRPTRSGGVARSLLAVPDNPLDVLVSLI
GLRDLGFRRVLPLPLDPAADFADHHRRSGRADRAVPAARRAFDGDFGAGRDRYLRMVFGG
DVTRPVDFDVLLAEPIPPDDDWSGPTLPTDADGALFGALARLVWEPLLDHETMT
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgttccatcttcatcgggccgaacgcaccgacgtcctggccgatgcgctggcacagcta
ctggcgatcccgctgccggatccgatgaccaccgagatcgtctcggtacccgcgccgggg
gtggaacgttggctgcaacagcgactggccacgcggttgggcacgtcgcgggggcgcgac
ggtgtggccgcaaatctggacttcacctcgccggcactcctgaccgatcagatactccag
agcgccgagcgtttcgtcgacggcgagggtgcgcgggttccggcggcgcagcgctggcgg
cccgcggcgatgacgtggccggtgctacgggtgctggacgatctgatcgacgacccccga
ctcgccgtgctcgccagacacgtcggggccgatgcctccgccgaggaccatcgtcggggc
cgccgctacgccaccgcccgccagatcgccgacctcttcgactcctacggcaggcagcgg
ccggcgatgctggccgcgtgggccgcggggaccgacaccgacggcgttggtgcgccggtg
cccgcggacctggcctggcagccggacgtctggcgcgcggttcggcgcgagatcggtcat
ccgcacccggcggagaggctcgccgagcattgcgcggccctgcgggagcatccgaacgcg
accgatctgcccgagcggctgtcggtcttcgggccgacccgggtcaccgagtcgttgctc
gcggtgctggtggcggtctcggcccatcgcgatgtgcacctgttcgtgccgcacccgagt
ccggcgctgtggcagatcctcgcgccgatcgctgccgtcggcaccgcggatggccggcgc
cgcgccgacaacccgccaccaccgctggcacatccgctgctcgccgggctgtcccacgac
gtgcaggagttgcagcggcgggtggcgccgatcgtcgatcacgacgtacaccacccgctg
cccggcgctgcggaccacgatggtgtgctggctgcgctgcaggcaggtctacgtgacgac
atgccggcccccgcgctgcgtgacgcggacacctcggtcgaggtccatgcatgtcacggc
gcggaacgtcaggtggaggtgttgcgcgaccggttgttgcacctgtttgccgccgatccc
accttgcagccgcgcgatgtgttgatcatgtgccccgacgtggaggtcttcgcccccttg
gtgcgcggtgccttcggacagccggggctcggacatccggcattcgaattgcgggtgcgc
ctggccgatcgcggtctacggcacaccaacagcgtgctggacgtgatcgccgcggtcgtc
gaactcgcggccggccgggtcaccgccggcgcggtcgtggacctgctcggtcgagacccg
gtgcgccggcgcttcgacctcaccgacgacgatctcgaggtgattcgggaatggttggtg
ggcagcaacatccgttgggcgatcgacgatgcacagcgggcgcggttcggtctcgccggc
ttccggcagggcaccttcgagaccggcatcgatcgcattctgctcggggcggtggccgag
gagaccgacaacgagtggctcgacaccgcgctgccgctcggcggggtcgaaagcaccgag
atcgatctggccggccggttcgccgagttcgtggatcgactgtcgaccacgctgaacgcg
ctgaccggcacacagtccgcggacgcctggacgcaggtgatcaccgacgcggtcgatgcg
ctcgtccgcaccgaggctgactccgaatggcaacgagcgcaggccctccgggccgtcgcc
ggcgccttcgacgatggtgcggtcgacgccgggggatcggacgcacccccggtggaccta
cggctgggcgacatccgcgatctcatcgccgggctggtgtcggctgcacccacccgtgcc
aacttccgcaccggggagctgaccgtgtgctcgatggtccccatgcgttcggtaccgcat
cgggtgatcgtgctcctcggagtcgacggcgatgccttccctcgtgcgttgcgccacgac
ggtgacgacgttctcgcacgggcgccgttgctgggggagcgtaacccgagggacgaagac
cgtcagttgttcctcgatgcgatctgtgcggccgaggaacatgtgctggtgttctacagc
ggcgccgacccggtgtcgggacaacgtattccgccggcggtggtggtcagcgaactcgtc
gatgcggtgtcggccatcaccggggtgcccgacggttgcgttcgccgccacaccctgcac
gcgttcgacgccgacaatttcacgcccggcgcgatcccgggggttgccggaccgttctcg
tatgacatcgccttgctcgccggggcccgggcgtcgggtacgacgccggatcggcggccg
ctcatcgccgacatccggctggacccacccgcccccgacgacatcgaactcgcatcgctg
atcggcttcctgaccaatccgatcgagggattcgtacggcaacgactcggcgcgcgcatc
ccggacgaggaactgccgcacgccgatcaactcgacgtcgcactcgcgccgctggaccgc
tgggccatcggcgatcgattcctgtcgcggatgctcgccggtaccgacctgaccgcttgc
caggcagccgaacgccgtcgcggcaccctgccgccgtacgcgttcggcacccgcgagctg
caggacatctctgccgacgtggcgtcggtgttcgcggcggccgagtccgctcgaatgggt
gcgcccgcgacggtggatgttgtggtgccactaccggacggacgacgcctgtacgggacg
gtcggcgacgtctatgccggcaccgtggtgacggcgtcttattccaaactccgggccaaa
caacggttgaccgcgtggattcggttgctcgcggtcgcggccgaccgacaggccgcgggc
cgcggagacgacatccacgctgcggctgtcatcgcgcggcgaccaacccgttcgggtggg
gtggcgcggtccttgctcgccgtcccggacaatccgctcgacgtactcgtgtcattgatc
gggttgcgcgatctcggatttcgccgcgtgttacccctgccgctggaccccgcggcggac
ttcgccgatcaccatcgccgttcgggccgcgccgaccgtgccgtgccggccgcgcgccgc
gcgttcgacggtgatttcggtgcgggccgagaccgctatctgcgcatggtgttcggcgga
gacgtcacccggccggtggacttcgatgtgctgctcgcagagccgatccccccggacgat
gactggtcggggccgacattgcccaccgatgccgacggcgcgctgttcggtgcgctggcc
cgcctggtgtgggagccgttactcgaccacgagacgatgacctga
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