Gordonia mangrovi: NWF22_23830
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Entry
NWF22_23830 CDS
T08472
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
gmg
Gordonia mangrovi
Pathway
gmg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NWF22_23830 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmg03400
]
NWF22_23830 (uvrA)
DNA repair and recombination proteins [BR:
gmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NWF22_23830 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NWF22_23830 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_16
AAA_25
nSTAND1
AAA_22
NACHT
DnaJ_CXXCXGXG
ATPase
Viral_helicase1
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
UVF78206
LinkDB
All DBs
Position
complement(5246919..5249801)
Genome browser
AA seq
960 aa
AA seq
DB search
MVDRLIVRGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGRAH
CPECGELIAKQTPQQIVDQVLEMEPGVRFQVLAPVVRTRKGEFVDLFGELQTQGFSRARI
DGVVHQLTDPPKLKKQEKHDIEVVVDRLAVKPTAKQRLTDSIETALRLADGIVVLDFVDL
EEDDPHRERRFSERMACPNGHPIAIDDLEPRSFSFNSPYGACPECDGLGIRKEVDEELVV
PDPELSLSDGAIAPWSTGHNADYFLRLMGGLADQMGFSVDTPWKKLPAKARTAILKGSDH
QVHVKFRNRYGRTRSYYTEFEGVLSFLARRMDQTESEQMKERYEGYMRDIPCPACQGARL
RPEILSVTLDHPTYGAMSIAEVCALSVAECADYLNGLKLDERQAAIAGRVLKEVQARITF
LLDVGLEYLSLSRAAGSLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIRSADWIVDIGPRAGEHGGEVVHSGSYQDLLKNRRSLTG
AYLSGRDELPIPAIRRPISRKKQLTVVGAREHNLQGIEVGFPLGVLTAVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVKGLDQLDKLVRVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGEGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTISEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRTNGRAVYILDEPTTGLHFEDIKKLLAVINGLVDKGNTVIVIEH
NLDVIKTADWIIDMGPEGGTGGGTVVAEGTPEDIALEPASHTGKFLADILDVDDTVASAG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
gtggttgaccgtctcatcgtccgcggtgcccgagaacacaacctgcgtgggatcgatgtc
gacctcccgcgggacagtctcatcgtgttcaccgggctgtcggggtcggggaagtcgtcg
ctggccttcgacaccatcttcgccgagggccaacgtcgctacgtcgaatcgttgtcggcg
tacgcccggcagttcctcggccagatggacaagcctgacgtcgacttcatcgagggcctg
tcgccggcggtgtcgatcgaccagaagtccaccaaccgcaacccgcggtcgacggtcggc
accatcactgaggtctacgactatctgcgtctgctctatgcccgtgccggacgtgcccac
tgcccggagtgcggcgaactgatcgccaagcagacgccgcagcagatcgtcgaccaggtg
ctcgagatggagcccggtgtccggttccaggtgctcgcgccggtggtgcgcacccggaag
ggggagttcgtcgatctgttcggtgaactgcagacccaaggtttctctcgtgcgcgtatc
gacggcgtcgtccaccagctgaccgacccgcccaagctcaagaagcaggagaagcacgac
atcgaggtcgtcgtcgaccgattggccgtcaagccgaccgccaagcagcgtctcaccgat
tcgatcgagaccgccctgcgcctcgccgacggcatcgtcgtgctcgatttcgtggacctc
gaggaagacgacccgcaccgcgaacgacgtttctccgaacgcatggcctgccccaacggt
cacccgatcgccatcgacgacctcgaaccgcggtcgttctcgttcaactcgccctacggt
gcctgcccggagtgcgacggcctcggcatccgcaaggaggtcgacgaggagctcgtcgtc
cccgatcccgagttgtcgctgtccgacggggccatcgcaccgtggtcgaccggccacaac
gccgactatttcctccggctcatgggcggtctggccgaccagatgggcttctcggtcgac
accccgtggaagaagctgccggccaaggcgcgcaccgcgatcctcaagggcagcgatcac
caggtgcacgtcaagttccgcaaccgctacggccgcacccggtcctactacaccgagttc
gaaggtgtgctctcgttcctcgcccggcggatggaccagaccgaatccgagcagatgaag
gagcgctatgagggctacatgcgcgacattccctgtcccgcatgtcagggtgcccgtctg
cggcccgagatcttgtcggtcaccctcgaccatcccacctacggtgcgatgtccatcgcc
gaggtgtgtgcgctgtcggtggccgagtgcgccgactacctcaacggcctgaaactcgac
gagcggcaggcggccatcgccggtcgggtactcaaagaggtgcaggcccgcatcaccttc
ctgctcgacgtcggcctggaatacctgtcgctctcgcgggcggcgggatcgctgtcgggc
ggcgaggcccagcgcatccggctggccacccagatcggatcggggctggccggcgtgctc
tatgtcctcgacgagccgtccatcggtctgcatcagcgggacaatcgtcgactcatcgag
accctcacgcggctgcgcgacctcggcaacacgttgatcgtcgtcgaacacgacgaggac
accatccggtcggccgactggatcgtcgacatcggtccgcgtgccggtgagcacggcggc
gaggtggtgcacagcggcagttaccaggatctgctgaagaaccgccggtcgttgacgggt
gcctatctgtccggccgcgacgaactgccgatcccggcgatccgccggccgatctcgcgc
aagaagcagctcaccgtcgtcggggcacgcgaacacaacctgcagggcatcgaggtcggg
tttccgctcggcgtgctcactgcggtgaccggggtgtccggctccggcaaatcgacgctc
gtcaacgacatcctcgcgaccgtgctggcgaacaaactcaacggcgcgcggcaggtgccg
ggtcgtcatacgcgtgtgaaggggctcgatcagctcgacaagctcgtgcgggtcgaccag
tcaccgatcgggcgtacgccgcgctccaacccggccacctacaccggcgtgttcgacaag
atccgcacgctgttcgcggcgacgaccgaggccaaggtgcgcggctaccagccgggccgg
ttctcgttcaacgtcaagggcggccgctgcgaggcgtgcaccggtgagggcacgatcaag
atcgagatgaacttcctgcccgacgtctatgtcccgtgcgaggtgtgccacggcgcgcgg
tacaaccgggagacgctcgaggtgcactacaagggcaagaccatctccgaggtgctcgac
atgccgatcgaggaggccgccgagttcttcgaaccggtcacgtcgatccatcggtacctg
aagactctggtcgacgtcggattgggctatgtgcggctcggacagcccgcgccgaccctg
tccggcggcgaggcacagcgcgtgaagctggcagccgagttgcagaagcgcaccaacggc
cgcgccgtctacatcctcgacgagcccaccaccggcctgcacttcgaggacatcaagaag
ctgctcgccgtcatcaacggtctcgtcgacaagggcaacaccgtcatcgtcatcgagcac
aacctcgacgtcatcaagaccgccgattggatcatcgacatgggacccgagggtggtacc
ggcggcggcaccgtcgtcgccgagggcacccccgaggacatcgccctcgagccggccagc
cacaccggcaagttcctcgccgacatcctcgacgtcgacgacacggtcgcctcagccggc
tga
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