Gordonia mangrovi: NWF22_23995
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Entry
NWF22_23995 CDS
T08472
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg03030
DNA replication
gmg03410
Base excision repair
gmg03420
Nucleotide excision repair
gmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NWF22_23995 (polA)
03410 Base excision repair
NWF22_23995 (polA)
03420 Nucleotide excision repair
NWF22_23995 (polA)
03440 Homologous recombination
NWF22_23995 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmg03032
]
NWF22_23995 (polA)
03400 DNA repair and recombination proteins [BR:
gmg03400
]
NWF22_23995 (polA)
Enzymes [BR:
gmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NWF22_23995 (polA)
DNA replication proteins [BR:
gmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NWF22_23995 (polA)
DNA repair and recombination proteins [BR:
gmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NWF22_23995 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NWF22_23995 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UVF78236
LinkDB
All DBs
Position
complement(5282514..5285264)
Genome browser
AA seq
916 aa
AA seq
DB search
MSPAKSSTVPAKKSATAAGRSSSSDGRPLLMLLDGHSLAYRAFFALPAENFKTATGQTTN
AVYGFTSMLINLLRDEEPTHIAAAFDVSRKTFRSEMFPEYKAQRSKSPDEFNGQVDLTKE
VLDALGIPVMAIEGYEADDIIATLATQADAEGYRVVVVTGDRDSLQLVNDSITVLYPRKG
VSDLTRFTPAEVEKKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLAS
LVDHVDEVRGKVGDALRTHLASVQTNRQLTELVRDMQLPSSPDDLAMVGWDRDRIHVLFD
DLEFRVLRDRLFSTLTSVEPEAESGFDLDGVVLGPGEVRAWLAEHTTTGRSGVAVTSPRQ
VVGADATGIAIAAADDVSAYIDVTSLDADDDQALAAWLADTERPKALHEAKWAVHAVRAR
GWTLGGVTSDTSLAAYLVRPGQRTFNLDDLALRYLRRELRDDTAADDGQMSLLDEDGGDA
KHAEQQMLEARAVAELADTLDTELERIDSLALLTEMELPLSFVLAELEAAGIAVDVDHFG
ELEADFSQRIRTAADAAYDVIGEQINLGSPKQLQTVLFDKLDMPKTKKTKTGYTTDADAL
QGLYEKTEHPFLAHLLEHRDATRLKVTVDGLLKSVADDGRVHTTFNQTIAATGRLSSTEP
NLQNIPVRTQAGRQIRAGFVVAPDHECLMTADYSQIEMRIMAHLSEDAGLIEAFNTGEDL
HNFVGSRAFGVPIDAVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKEQMEAYFA
RFGGVRDYLHNVVDEARRNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAA
DIIKVAMINVYGRLRREGLNSRMLLQVHDELVIEVATGEREAVETVVREEMGSAITLSVP
LEVSVGYGRSWDDAAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcccgcgaagagttccaccgtgcccgcgaagaagtccgccaccgccgccggcagg
tcgtcgagctcggacggacgtccactgctgatgcttctcgacgggcattcactggcctac
cgggccttcttcgcgctgccggccgagaacttcaagaccgcgaccggccagaccaccaat
gcggtgtacggcttcacctcgatgctgatcaatctgctgcgcgacgaggagcccacccac
atcgcggcggccttcgacgtctcccgcaagaccttccgctcggagatgttcccggagtac
aaggcgcagcgttcgaagtcgccggacgagttcaacggacaggtcgacctcaccaaggag
gtactcgacgcgctgggcatcccggtgatggccatcgagggctacgaggccgacgacatc
atcgcgacgctggcgacgcaggccgacgccgagggttaccgggtcgtggtggtcaccggc
gaccgggattcgttgcagctcgtcaacgactcgatcaccgtgctctacccgcgcaagggc
gtctcggacctcacccggttcaccccggccgaagtggagaagaagtacggcctcacgccg
gcacagtatcccgactacgccgcgctgcgcggtgatccgagtgacaatctgcccggcatc
cccggcgtgggcgagaagaccgcgtcgaagtggattcgcgaatacggttcgctcgcgtcg
ctggtcgaccacgtcgacgaggtgcggggcaaggtgggcgacgcgctgcggacacatctg
gcgtcggtacagaccaaccggcagctcaccgaactcgtccgggacatgcaactgccgtcg
agtccggacgacctcgcaatggtgggctgggaccgcgaccgcatccatgtcctcttcgac
gatctcgagttccgggtgctgcgcgatcgtctgttctcgacgctgacctcggtggaaccc
gaggccgagtcgggtttcgacctcgacggtgtggtgctgggcccgggtgaggtccgcgcc
tggctggccgagcacacgaccacgggccgcagcggcgtcgcagtcacctccccgcggcag
gtcgtcggtgccgatgccaccggcattgccatcgccgcggcggacgacgtctcggcctac
atcgacgtcacgtccctcgacgccgacgacgaccaggcgttggccgcgtggctggccgac
accgagcgacccaaggctctgcacgaggcgaaatgggctgtacacgcggtgcgcgcccga
ggctggacgctcggcggcgtcaccagcgacacgtcgttggcggcgtacctggtacgaccc
gggcagcgcacgttcaacctcgacgatctcgcgttgcgctatctgcggcgcgagctgcgc
gacgacacggccgccgacgacggtcagatgtcgctgctcgacgaggacggcggcgacgcc
aagcatgccgagcagcagatgctggaggcccgggcggtcgccgaactcgccgacaccctc
gacaccgaactcgaacgcatcgactccctggccctgctgaccgagatggagttgccgctg
tccttcgtcctcgccgagctcgaagccgccggcatcgccgtcgacgtcgaccacttcgga
gagctggaagccgacttctcccaacgcatccggaccgccgccgacgccgcctacgacgtg
atcggcgaacagatcaacctgggttcgcccaagcaactgcagactgtgctgttcgacaaa
ctcgacatgccgaagaccaagaagaccaagaccggctacaccaccgacgccgacgcgctg
caaggtctgtacgagaagaccgagcacccgttcctggcgcacctgctcgaacatcgcgac
gccacccgactcaaggtcaccgtcgacggcctgctcaagtcggtcgccgacgacgggcgc
gtgcacaccacgttcaaccagacgatcgcggccaccggccgactgtcgtcgaccgaaccc
aacctgcagaacatccccgtgcggacccaggcgggccgacagatccgcgccgggttcgtg
gtggcgccggaccacgagtgcctgatgaccgccgactacagccagatcgaaatgcgcatc
atggcgcacctctccgaggacgccggactcatcgaggcgttcaacaccggcgaagacctg
cacaacttcgtcgggtcgcgcgccttcggggtgcccatcgacgcggtcaccaccgagatg
cggcaccgtgtcaaagccatgtcctacggactcgcctacggactgagcgccttcggcctc
gccgcgcagctcaagatcagccgcgacgaggccaaggaacagatggaggcctacttcgcg
cgcttcggcggcgtgcgcgactacctgcacaacgtggtcgacgaagcccgccgcaacgag
tacaccgcgaccctgttcggtcggcgccgctacctgcccgacctcaacagcgacaactgg
cagcgccgccagtcggccgaacggatggcgctcaacgcgccgatccagggcaccgcggcc
gacatcatcaaggtggcgatgatcaacgtgtacggccggctccgccgcgagggactgaac
tcccgcatgctgctgcaggtccacgacgaactcgtcatcgaagtcgccaccggcgagcgg
gaagcggtcgagacggtcgtccgcgaggaaatgggaagcgcgatcaccctctcggtgcca
ctggaggtctcggtcggctacggccggtcgtgggatgacgcggcgcactga
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