Gordonia mangrovi: NWF22_24455
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Entry
NWF22_24455 CDS
T08472
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg03030
DNA replication
gmg03430
Mismatch repair
gmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NWF22_24455 (dnaE)
03430 Mismatch repair
NWF22_24455 (dnaE)
03440 Homologous recombination
NWF22_24455 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmg03032
]
NWF22_24455 (dnaE)
03400 DNA repair and recombination proteins [BR:
gmg03400
]
NWF22_24455 (dnaE)
Enzymes [BR:
gmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NWF22_24455 (dnaE)
DNA replication proteins [BR:
gmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NWF22_24455 (dnaE)
DNA repair and recombination proteins [BR:
gmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NWF22_24455 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UVF78317
LinkDB
All DBs
Position
complement(5383206..5386754)
Genome browser
AA seq
1182 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKVSPLFAEAKRLGMTAIGMTDHGNMFGASEFYNTAVAND
IKPIIGIEAYVAPESRFNTKRVTWGTRDQKSDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWSRMDAELIAQYAEGIIATTGCPSGEVQTRLRLGHDREALEAAAKWQEI
FGKENFYLELMEHGLEIERRVRDGLLDIGRKLGIKPLVTNDCHYVTQEHAKSHEALLCVQ
TGKTLSDPTRFKFDGDGYYLKSPAEMRELWDSMVPGGCDSSVEIGERVQSYADVFTHRDR
MPIFPVPEGESQQTWLRKEVAKGLAETRFAGTEVPEEYQRRANYELDVIIQMGFPAYFLV
VGDLIQHALEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDID
IDFDDRRRGEMVRYATERWGSDKVAQVITFGTIKTKAALKDSARVQFGQPGFAIADRITK
ALPPPIMAKDIPVWGITDPEHERYAEATEVRTLIETDPDVKKIYDTALGLEGLIRNAGVH
ACAVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIEN
IKTNRGIDLDLDAAPLEDPKTYELLARGDTLGVFQLDGGPMRELLKRMQPTGFEDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQQVRPIHPELEEPLKEILADTYGLIVYQEQIMQIAQK
VAGYSLGRADILRRAMGKKKAEVLAAEFEGFEEGMKSNGFSSAAIKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLSDCRKLGITVLPPDV
NESQRNFAAVGGDIRFGLAAVRNVGTGVVSSILAARDEKGKFTSFSDYLGKIDVTACSKK
VTESLIKAGAFDSLNHPRKGLFLVHGDAVESVIGTKKAEAIGQFDLFGDAGGADDSMAEV
FAVKVPDEEWESKHKLALEREMLGLYVSGHPLGGVEHAIAAQTDTSITALLEGSVPDGAQ
ITIGGIISAVNRRVNKKGEPYAVVTLEDMVGGVEVYFFPRAFSVYGMDIVPDNIVLIKAR
VNVRDDSTMISANDLAVPDLAAVGTAKPVALTLSARTCTPDRVQALKQVLTRHPGTADVH
VTLVSEQRSTVLRLTEALRVSPSSALMGDLKALLGPSCLGGG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattcgttcgtgcacctgcacaaccacaccgagtactcgatgctcgacggtgcc
gcgaaggtgtcgccgctgttcgccgaggccaaacgcctcggcatgacggcgatcggcatg
accgatcacggcaacatgttcggtgcgagcgagttctacaacaccgccgtcgccaacgac
atcaagcccatcatcggcatcgaggcctacgtcgcacccgagtcgcgcttcaacaccaag
cgcgtcacctggggcacccgcgatcagaagagcgacgacgtctccggctcgggcgcatac
acccacatgacgatggtcgccgagaacgcgaccggtctgcgcaatctgttcaagctgtcg
tcgttggcgtcgatcgaagggcagctcggcaaatggtctcggatggacgccgagctgatc
gcgcagtacgccgagggcatcatcgccaccaccggctgcccgtcgggtgaggtgcagacc
cggctgcgactcggtcacgaccgcgaggccctcgaggccgcggccaagtggcaggagatc
ttcgggaaggagaacttctatctcgagctgatggaacacggtctggagatcgagcgccgg
gtccgcgacggcctgctcgacatcggccgcaagctcggcatcaagccgctggtcaccaac
gactgccactacgtcacgcaggaacacgccaagagccacgaggcgctgctgtgcgtgcag
accggcaagacgctgtccgatcccacccgattcaagttcgacggcgacggctactacctg
aagtcgcctgccgagatgcgcgaactgtgggactcgatggtgccgggtgggtgcgactcg
tccgtcgagatcggcgagcgtgtgcagagctacgccgacgtcttcacccatcgcgaccgg
atgcccatcttcccggtccccgagggggagtcgcagcagacctggctgcgcaaagaggtc
gccaaaggcctcgcggagacccgtttcgccggcaccgaggtgcccgaggaataccagcgt
cgggcgaactacgagctcgacgtcatcatccagatgggcttcccggcttacttcctggtg
gtcggcgacctgatccagcacgctctcgaggtcggcatccgggtgggcccgggccgtggt
tcggcggccggttcgctggtggcgtgggcactgggcatcaccaacatcgatcccatcccg
cacgggttgctgttcgagcgcttcctcaaccccgaacgtgtctcgatgccggatatcgac
atcgacttcgacgaccgtcgccgcggtgagatggtgcgctacgccaccgagcggtggggt
agcgacaaggtcgcccaggtcatcaccttcggcaccatcaagacgaaggcggcactcaag
gactccgcgcgagtccagttcgggcagcccggattcgccatcgccgaccggatcaccaag
gcgctgccgccgcccatcatggccaaggacatcccggtctggggtatcaccgaccccgaa
cacgagcggtacgccgaggccaccgaggtccgcacactgatcgagaccgacccggacgtc
aagaagatctacgacaccgcactgggcctcgaagggctgatccgcaacgcgggcgtgcat
gcctgcgccgtcatcatgtccagtgagccgctcaccgacgcgatcccggtgtggaaacgc
gcgcaggatggcgccatcatcaccggctgggactatccgtcgtgcgaggccatcggcctg
ctgaagatggacttcctcgggctgcgcaacctcaccgtcatcggtgacgcgatcgagaac
atcaagaccaatcgcggcatcgacctcgatctcgacgccgcgccgctcgaggacccgaag
acatacgaactgctcgcccgcggcgacacgctcggggtctttcagctcgacggcggaccc
atgcgcgaactcctgaaacgaatgcagcccacggggttcgaggacatcgtcgcggtgctc
gcgctgtatcggcccggcccgatgggcatgaacgcgcacaacgactacgccgatcgcaag
aacggacggcagcaggtccggccgatccacccggaactcgaggaaccgctcaaggagatc
ctcgccgacacctacggtctgatcgtctaccaagagcagatcatgcagatcgcgcagaag
gtggccgggtactcgctcggccgagccgacatcctgcgccgtgcgatgggcaagaagaag
gccgaggtcctcgccgccgagttcgagggcttcgaggagggcatgaagtccaacggcttc
tcctcggccgcgatcaaggcgctgtgggacacgatcctcccgttcgccgggtacgcgttc
aacaagtcgcatgctgccggctacggactcgtctcgttctggaccgcctacctcaaggcg
aactaccccgccgagtacatggcgggtctgctgacctcggtcggcgacgacaaggacaag
gcggccatctatctgtcggattgccgcaagctcggcatcacggtgctgcctcccgacgtc
aacgaatcgcagcgcaacttcgcggcggtcggcggcgacatccggttcggcctcgccgcg
gtccgtaacgtcggcaccggcgtggtgtcgtcgatcctcgccgcgcgggacgagaagggg
aagttcaccagcttctccgactacctcggcaagatcgacgtgaccgcatgcagcaagaag
gtcaccgagtcgctgatcaaggcgggcgcgttcgactcactgaaccacccgcgcaaggga
ctgttcctggtccacggcgacgcggtcgaatcggtcatcggcaccaagaaggccgaggcc
atcggccagttcgacctcttcggcgacgccggaggcgccgatgactcgatggccgaggtg
ttcgcggtcaaggtgccggacgaagagtgggagtccaagcacaagctcgccctcgagcgc
gagatgctcgggctctacgtatccggccacccgctcggcggtgtcgagcatgcgatcgcc
gcccagaccgacacgtcgatcaccgcgttgctggagggatcggtacccgacggcgcccag
atcaccatcggcggcatcatctccgcggtgaaccggcgggtcaacaagaagggcgagcca
tatgcggtggtcaccctcgaggacatggtcggcggggtggaggtctacttcttcccccgg
gcgttctccgtctacgggatggatatcgtccccgacaacatcgtgctgatcaaggcgcgg
gtcaacgttcgtgacgactccacgatgatcagcgccaacgacctcgccgtacccgatctg
gcggccgtcgggaccgcgaaacccgtggcgttgaccttgagcgcccgcacctgtaccccc
gatcgcgtccaggcgctcaagcaggtgctgacgcgtcacccgggcaccgcggacgtgcat
gtgacgctggtgagtgaacagcggtccacggtcttgcgactgaccgaggccctgcgggtc
agcccgagttcggcgttgatgggtgatctgaaggcgttgctcggacccagctgtctcggc
ggaggatga
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integrated database retrieval system
