Gadus morhua (Atlantic cod): 115528795
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Entry
115528795 CDS
T10832
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115528795 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115528795 (xpc)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115528795 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Motif
Other DBs
NCBI-GeneID:
115528795
NCBI-ProteinID:
XP_030193008
Ensembl:
ENSGMOG00000019246
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Position
1:24647336..24659283
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AA seq
980 aa
AA seq
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MAKRKESAGSAERTIKKHKPVSKEKTPSRKTKAKKNTGNGLVEEEEKLVRKVSAKTRGSS
TRTAVSTTSTTSKYFPSPPKKKALSNNHDNEDGDLHMVTMATPILPMDVTGPSRPKKEDS
EEEDESEEDDWEDVEELSGPLGPAPPAEPSLPTQAVEIEIETPELIRMRQKKEKRKAEFE
QYLKRMVNRLNKDLLEDTHKVHLMCLIANGMFRNRLCSEPDLLAITLSLLPPHFMMVAKE
RIDHNYLSGLLKWFGATFTLNPSLPHVDLTDPRGLLERRLASLSARDHQEMTHLLLLVLR
SLNLFCRLVLSLQPISFKPPRVKGKGSESSGGRTPGKSPGSGKSPKGSPPDSKISPGNKR
PALVSAATAGKGRGASGGKRAKQEEEDGEEEEEVEEEKPEVKSGRKGGGQRPKNAKRRSV
ASKVSYKEESGSGEDVLSDGEEEEEEEEFQATGEEDSEEEEVEGGRAKHGKGRSHGKRKH
SSGDSGRKRNSSSSGGGGKRREKINNNDEDDEEDDDDGNVDKVGGGEGTKGKRRSGGGGG
RKKRDGPGADEWLEVFVEKTSAWLCVDAEHGVDRPQLCWRNATQPMAYVVAVDGDGRLKD
LGRKYDPTWMTSSRKRRVDDEWWGETLTPFLPWEGERDDKEEKELQAKLLDRPMPTSIAE
LKNHPMYALTRHLLKYEALYPPTAAVLGYCRGEPVYSRDCVHQLHSRETWLKEARTVRIG
EEPFKMVKGFSNRSRKARMMVEQKEEKDLALYGEWQTEEYQPPIAVEGKVPRNEYGNVYL
FKPCMLPVGCVHLRLPTLNRVARKLDMDAAPAVTGFDFHGGYSHAVTDGYIVCEEHEEIL
RAAWEEDQALQKQKEIEKREKRATTNWKLLVKGLLIRERLQLRYGKKGQGLGGAGGSSQG
HGQDGEGVDGLSADEEELEGGVPVEDPGDKTPAEMLAKAWPQNRQDEGEEEGGGKSRPKR
KITQRERKCQEKTMFPFEKA
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagaaaagaatccgcgggatctgcagagagaaccattaagaaacacaagccg
gtgtctaaagaaaagacccccagtcgcaaaactaaagcaaagaaaaacacaggtaacggg
cttgtggaggaagaggagaagcttgtgaggaaggtgagcgcgaaaacccgtggctcctct
actcgcactgccgtctccaccacctccaccaccagcaaatacttcccgtctccgcccaag
aaaaaagcccttagcaacaaccatgacaacgaagatggggatctccacatggtaaccatg
gcaacgcccatccttcccatggatgttacgggaccctcacggccaaaaaaagaggacagc
gaggaagaggatgagagtgaggaagacgactgggaagatgttgaagagctgtctgggccc
ctgggccccgcgccccctgctgagccctctctgcccactcaggccgtggagatcgagatc
gagactccggagttgattcgcatgaggcagaaaaaagagaagaggaaagcagaatttgag
cagtatcttaagcggatggttaatcgcttaaacaaggatctgctggaggatacacacaag
gtccacctgatgtgcctgatagccaatgggatgttccggaaccgtctgtgcagcgaaccg
gatctgctggccatcacgttgtccctcctacccccccacttcatgatggtggccaaggaa
cgcattgaccacaactacctctcgggactgctgaaatggtttggggccaccttcaccttg
aaccccagcctcccccacgtagacctcaccgacccccgggggctcctggagaggcgcctg
gccagcctgtcggcccgggaccaccaggagatgacccatctgctccttttggtgctgagg
tctctgaatctcttctgccgattggtcctttctctgcagcccatttccttcaaaccccct
cgagtcaagggcaaagggtcagagagcagtggtggccgtaccccagggaaaagccccggc
agtgggaagtcccccaagggaagccccccggactccaagatctcccccggaaacaagagg
cccgccctggtctccgctgccactgctgggaagggcaggggagccagcggcgggaagcgg
gccaagcaggaagaggaagacggggaggaggaggaggaggtggaggaagagaagccagag
gtgaagagcgggagaaaggggggaggccagaggccgaagaacgccaagcggcgcagcgtg
gcttccaaggtgagctacaaggaggagagcggcagtggggaggacgtgctcagcgacggg
gaggaggaggaggaggaggaggagtttcaggcgaccggcgaggaggatagcgaggaggag
gaggtggaagggggcagggccaaacacgggaaggggaggagccacgggaaaaggaaacac
agcagcggcgactccgggagaaagaggaacagcagcagcagcggcggcggcgggaaaaga
cgcgagaaaatcaacaacaacgatgaagacgacgaggaagacgacgacgacggcaatgtg
gacaaagttggaggaggagagggtaccaagggtaagcggaggagcggcggcggcggcggg
aggaagaagagggacgggcccggcgccgacgagtggctggaggtgttcgtggagaagacg
tcggcgtggctgtgcgtggacgcggagcacggcgtggaccgcccgcagctctgctggcgg
aacgccacgcagcccatggcctacgtggtggcggtggacggcgacggccgcctgaaggac
ctgggcaggaagtacgaccccacctggatgacctcgtcaagaaagcgccgggtggacgat
gagtggtggggcgagacgctgacgcccttcctcccgtgggagggggagcgggacgacaag
gaggagaaggagctccaagcgaagttgctggacaggccgatgcccacctccatagcggag
ctgaagaaccaccctatgtacgctctgaccagacacctgctcaagtacgaggctctctac
ccccccacggcggccgtgctggggtactgcaggggggagcccgtatactccagggactgt
gttcaccagctgcactcaagagaaacctggctgaaggaggcccgcactgtgcggatagga
gaggagccattcaagatggtgaagggcttctccaaccgctcccgtaaggcgcgtatgatg
gtggagcagaaggaagagaaggacctggctctgtatggggagtggcagacggaggagtac
cagccccccatcgctgtggagggcaaggttccccgtaacgagtacgggaacgtgtacctg
tttaagccctgcatgctgcccgtgggctgcgtccacctgcgtctgcccaccctgaaccgc
gtggcccgcaagctggacatggacgccgcgcccgccgtcacgggcttcgacttccatgga
ggatactcgcatgctgtgaccgacggctacattgtgtgtgaggagcacgaagagattctc
agagcagcctgggaggaagatcaagcgctccagaaacagaaggagattgagaagcgagag
aagcgggccaccaccaactggaagctactggtgaagggcctgctgatcagggagaggctc
cagctacgatacggcaagaagggccaaggcctcggaggagccgggggctcgagtcagggt
catggccaggacggagagggggtggacgggctatcggctgacgaggaggagttggagggt
ggggtcccggtcgaggaccctggagacaagacaccagccgaaatgctggccaaggcctgg
ccccagaacagacaggatgagggagaggaggagggaggggggaagagcaggccgaagagg
aagataacacagcgtgagcggaaatgccaggagaaaaccatgtttccctttgagaaggcg
tga
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