Gadus morhua (Atlantic cod): 115528830
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Entry
115528830 CDS
T10832
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
115528830
Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115528830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF_3
EGF
hEGF
Plasmod_Pvs28
Collagen
EGF_2
Motif
Other DBs
NCBI-GeneID:
115528830
NCBI-ProteinID:
XP_030193042
LinkDB
All DBs
Position
16:complement(7985712..8008439)
Genome browser
AA seq
1700 aa
AA seq
DB search
MHCNSIRPADPLRPGGSMAALRAVILLWACVLPVRGQGGVAQTTCQVLCSQHGCVNHCSA
GNLTSLPSTHTRSHTHARSQTHSRTRGEAQSAFRVSVCPLCNNGGVCVQRDRCLCPPSFT
GKFCQLPAPTQHGPAPSPGANQVRTQSEYLLPLQSRPIREEQTVRGATRLRTQHPLQASL
KITQVGKVLGSGPGQQSEAGPPAPAGLRVQAQTLRGAGTYTQQSGFKYCFRQVTDKQCGS
PLPGLRSKETCCRGVGKAWGITECVLCPPHSGHQGNSSCPAGFHRVNGTECVDVNECEEP
GVCEHGMCVNTRGSYSCVCRAGFILDASHGICISQRVISEEKGQCYRVLGPGNGPSSCSL
PILKNITKQICCCSRVGKAWGAHCQHCPYFASLEFKDICPAGPGYHYSASALQFHQRASG
SAQLITPGNQANQDHQPARTGIQTQSSNTGSGFQPQTPSSKGETGPPLRSAGSSGSTGTS
GSAGSSVSTGTSGSAGSRSSAGSNVATGTRGSAGSSGSAGSSVSTASSGSAGNSGSPWSS
GSAGSSGPTGSRNSIGSTGSAGSSVSTGSTGSAGSSLSIGSSGSTGSSGSAASSGSTGTS
GSTGSSGTTWTSGSSGSRGSAGSAGSAGSSVTTGTRGSQASSGPDRGVSSPAQAALPVPP
SKADSVPVRAPVVPKQTSRPAATIPKTAGGQFPSASRPFNPAGRGDWPRPLPPPVQPTVR
PGRVQATMQSACDRPGVCGAGRCVALAGGRHTCRCEEGYELNSQRTHCRDMDECQLGSCS
NGRCDNTPGSYKCVCHRGYHLEGNSCTDLDECEDPLRCPGQECVNNQGSYRCVSCQSGYG
LLEGLCKDVDECEDPLRCPGQECVNKEGSYRCVSCQSGYGLLEGLCKDVDECIQSPCSNG
GCENTPGSYRCVCHHGYRLQGNTCKDIDECTDPSQCPGQMCVNSVGSYHCVSCRPGYTLH
NRQCTDLDECAGERVCAADRVCVNTPGSFKCNCLPGYRTTGLTMQCHDLDECAGERVCAA
DRVCVNTPGSFKCDCMPGYRTTGLTMQCHDINECSEGDFCFPTGECVNTDGSYECVCQQG
YYPGNNGTVCLDEDECVSLRGVCGTARCQNAPGTFSCVCDAHGHEFHARTRECVLKQVAG
RASLPVTSSSSSSSSSSSSYSHDVAPGPGRPPPPPAGGPGDLRECYYSLELSATCRLLAA
NTTQQECCCTVGEGWGLGCQYLTCPALNTAEYQSMCPSGKGYITTGSAAFSYTDVDECKR
FHPEVCKSGVCVNNIPGYTCYCSSGFIYHHTLLECVDVDECEQEDSCPGGLCVNTVGSYF
CTCHPPLVLDHSQRTCINATHHAAEEGVSLCWQQVSADLVCQSPLGRRQVSFQECCCLYG
EGWGLQCALCPGTDTDDYAHLCSSVLPIPGSSFPDPFRGEPSRRLGPGAGPGGSAGRGRG
AGGAGGAAPPYGAPYGADAFVPGGLPYGGAGGYDDYLQAGGQRTPGTYGLPDGTGRSYYD
EGDSHPPSFGLPPDPRSEASFGARPPPSLPNGRPLSIAPLPRGGAYRPRGGSYVPGGGAY
VPGAGGYIQEEEPVEEEEPWRPRPPFPGFAGRGGTPQRLYDRRYDSFTGRRPSSAEDCGI
LGGCENGRCIRVEEGYTCDCHHGYQLDMASMTCRDINECEEGGPASECVNARCVNTDGSY
RCICWRGYIMTQGPHYCTAA
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtaactccatcaggcctgcggaccctctgcggcccggcggcagcatggcggcc
ctgcgggctgtgatcttgctgtgggcgtgtgttctccctgtgaggggccaggggggcgtg
gcccagaccacctgccaggtgttgtgctctcagcacggctgtgttaaccactgctctgct
gggaacctcacctctctgcccagcacacacacgcgctcacacacgcacgcgcgctcacag
acacactcacgcacccgaggagaagcacagtcagccttcagagtctctgtgtgtcctctc
tgtaacaacgggggagtgtgtgtccagagagatcgatgtctctgtcctccttccttcacc
gggaagttttgccagctccccgcccctacccagcatggtcccgccccctcgccaggagcc
aatcaggtgcggacccagtcagaatacctcctccctctgcagagccgtccaataagagag
gagcagacagtaagaggcgccactaggttgagaacacagcaccccctgcaggccagcctt
aaaataacccaggtggggaaggtgttggggtccggtcctggccagcagagcgaggcggga
cccccggcgcctgcaggactgagggtccaggcccagaccctgcggggggctggaacctac
acccagcaatcaggcttcaaatactgcttcagacaggtgaccgacaaacagtgtggttca
cctcttcctggtctgcggagcaaggagacgtgctgcaggggggtggggaaagcctggggt
atcactgagtgtgttctctgtcccccccactcaggtcaccaaggcaacagcagttgtccg
gctggctttcacagagtcaatggaacagagtgcgttgatgtaaatgagtgtgaggagccc
ggtgtgtgtgaacatggtatgtgtgtgaacactagaggcagctacagctgtgtgtgcagg
gcggggttcattcttgatgcatctcacggaatctgcatctcccagagggtgatatcggag
gagaaaggccagtgttaccgggtgcttgggccgggcaatggtccgtcctcctgctcgctc
cccatcctcaagaacatcacaaagcagatctgctgctgcagccgcgtgggcaaagcctgg
ggggcccactgccagcactgcccctacttcgcctcactggagtttaaggacatctgccca
gctggtcctgggtaccactactcagcctccgcactgcagttccaccagagggccagcggg
agtgctcagctgataactccgggcaaccaggcaaaccaggaccaccagcctgcaaggacc
ggcatccagacacagagctccaacacaggttctgggttccagccgcagaccccgtcctcc
aaaggggaaactggacctcctctgcgttcagctgggtccagtggttctactgggaccagt
ggttctgctgggtcaagcgtttctactgggaccagtggttctgctgggtccaggagttct
gctgggtcaaacgttgctactgggacaagaggctctgctggttccagtggttctgctggg
tcaagcgtttctactgcttcaagtggttctgctgggaacagtggttctccttggtccagc
ggctccgctggatccagtggtcctactggttccaggaattctattgggtccactggttct
gctgggtcaagcgtttctactgggtccactggttctgctggatcaagtctttctattggt
tcaagtggttctactgggtccagtggttctgctgcttccagtggttctactgggaccagt
ggttctactgggtcaagcggtacgacatggaccagtggttcttctgggtccagaggctct
gctggttccgctggttctgctgggtcaagcgttactactgggaccaggggttctcaggcg
tccagtggtcctgatcggggggtcagcagcccagcccaagctgccctccccgtcccccca
tctaaagcagacagcgttcctgtaagagcaccagtggttccgaaacagacctcgagacca
gcggccactatacccaaaactgcaggaggtcagttcccatctgcgtcacgtccttttaac
ccagcaggtcgcggggactggccccggcccctcccccctccagttcagccaaccgtgcgg
cccggtagagtccaggccaccatgcagagtgcatgtgacaggccaggcgtgtgcggcgct
gggcgctgtgtggctctggcgggaggaagacacacctgtaggtgtgaagaaggatacgag
ctgaacagtcagaggacacactgcagagatatggacgagtgtcagctgggttcctgtagc
aacggtcgctgtgacaacactcctggcagctacaagtgtgtttgtcaccgtggttaccac
ctagaaggaaactcctgtacagatctagatgagtgtgaggacccactgcgctgtcctggt
caggagtgtgtgaacaaccaggggtcttacagatgtgtttcttgtcaatctggatatgga
ctgttggaaggactctgcaaagatgtggatgagtgtgaggacccactgcgctgtcctggt
caggagtgtgtgaacaaagaggggtcttacagatgtgtttcctgtcaatctggatatgga
ctcttggaaggactctgcaaagatgttgatgagtgcattcagtctccgtgctcaaatggc
ggttgtgaaaacacacctgggagctacaggtgtgtctgtcaccatggttaccgtctccaa
ggcaacacctgtaaagatatagatgaatgtacagatccctctcagtgcccaggccagatg
tgtgtgaactctgtcggttcgtatcactgtgtgtcctgtaggccaggatacactctacac
aacagacagtgtaccgacctagacgagtgtgcgggtgagcgtgtgtgcgcagcagaccgt
gtgtgtgtcaacacgccgggatccttcaaatgtaactgtctgcctgggtatcgaaccacc
ggcctcacaatgcagtgtcacgatctagacgagtgtgcgggtgagcgtgtgtgcgcagca
gaccgtgtgtgcgtcaacacgccgggatccttcaaatgtgactgtatgcctgggtatcga
accaccggcctcacaatgcagtgtcacgacattaatgagtgttctgagggggacttctgc
ttcccgacgggggagtgtgtgaacactgatgggtcgtacgagtgtgtgtgtcagcaggga
tactaccccgggaacaatggaacagtgtgcctggacgaggacgagtgtgtgtctctgcgg
ggtgtgtgtggtacagcgcgctgccagaacgcgccgggaaccttctcttgtgtttgtgac
gcgcatggacacgagttccacgcacgcacgagagagtgtgtcctgaaacaagttgcaggg
cgagcaagtcttcctgtgacctcctcctcctcctcctcctcctcctcctcctcctcctac
tcccacgatgtagcccccggtccggggaggcccccccctcccccagcgggaggtcccggg
gatctgagggagtgttactatagccttgagctcagcgccacctgcaggctgctggctgcc
aacaccacacagcaggagtgctgctgcaccgtgggggagggctgggggctgggctgccag
tacctcacctgccccgcccttaacacagctgaatatcagtcaatgtgtccaagtgggaag
ggctacatcacaaccggatcagcagctttcagttatacagatgtggacgagtgtaagcgg
ttccatccagaggtgtgtaaaagcggtgtgtgcgtgaacaacatcccaggatacacctgc
tactgctccagtggcttcatctaccatcacacactgctggagtgtgttgacgtggacgag
tgtgagcaagaggacagctgcccaggtgggctgtgtgtcaacacggtgggctcctacttc
tgtacctgtcaccccccgctagtgctggaccacagccagcgcacctgcatcaacgcaaca
caccacgccgcagaagagggcgtgtctctgtgctggcagcaggtgtcagctgacctggtg
tgccagagtcccctggggagacgacaggtcagcttccaggaatgctgctgcctctacggc
gaggggtggggcctgcagtgtgccctctgccctgggacggatactgacgactatgctcat
ctctgtagttcggttctgccaatccctggctcgagcttcccggatccgttccgaggagag
cccagtcggaggctgggtccgggagcgggtccgggcgggtctgcagggagggggagagga
gcaggaggagcaggaggagcagcacctccctacggcgccccctacggagcagacgcgttc
gtgcccggggggctgccctatgggggagcagggggttacgatgactacctccaagcaggg
ggtcagagaacccccggaacctacggcctacctgacggaaccggacgcagttactatgac
gagggagactcccaccccccctccttcgggctgccgcccgaccctcgctccgaggcatcc
ttcggggcacgcccccctccctctctgcccaatggccggcccctcagcattgcccccctc
cccaggggcggggcctacaggcccaggggcgggtcctatgtaccagggggcggggcgtat
gttcccggggccgggggctacatccaggaggaggagcctgtagaggaggaggagccctgg
cgaccgaggccaccgtttcctggcttcgcaggaaggggcgggactccacaaaggctgtat
gacaggcgttatgactccttcacagggcgtaggcctagtagcgcggaggattgtgggata
ctgggcggctgcgagaacggcaggtgcatccgtgtcgaggagggctacacctgcgactgt
caccatggataccagctggacatggcctcgatgacctgcagagatattaacgagtgtgag
gaaggcggcccggcgtcggagtgtgtgaacgcccgctgcgtcaacactgacggatcgtac
cgctgcatctgctggagaggttacatcatgacccaggggccccactactgcaccgctgcc
tag
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