Gadus morhua (Atlantic cod): 115528882
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Entry
115528882 CDS
T10832
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115528882
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Gene silencing
Transposable elements
115528882
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
MarR_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
115528882
NCBI-ProteinID:
XP_030193126
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Position
16:complement(28843244..28845404)
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AA seq
343 aa
AA seq
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MAVLALLEDIANGHIRNERVFRDYYDFLAHDDDWLISRFRFPRAILLELCTELSPGLERQ
TARSHALPVPIQVLTTLGFLATGSFQRELADRSGMSQGALSRAIPPVLNGIIRISARYIR
FPYDAVNQANIKAQFAAIAGFPNVIGAIDCTHIAIKAPSEGEYEYVNRKHFHSLNVQIIC
DAQMRLTNIVARWPGSTHDSFVLRNSSVGNRLEAGRVCDGWLIGDSGYALRPWLLTPLAN
PQTVREQRYNDIHARTRTVVVRAIGQLKSRWRCLDRSGGMLLYHPEKVCRIVQACGVLHN
VAHRHGVPLREVMDLPEDPDPGPNNAQPNVEAIRIRQQLIGRI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttggccttattagaagatattgcgaatggtcacattcgaaatgaacgagtg
ttccgtgattattacgattttttggctcatgatgatgactggcttatcagccgattcaga
tttccaagagctatcctcttggaactatgtactgagttgagcccgggtttggagaggcag
acggcgaggagtcacgcattgccagttccaatacaagtcctgactacgcttggttttcta
gcaacaggatcattccagagggaattggctgaccggtcaggaatgagtcagggagctctg
agccgcgccattccgcctgttttaaacgggatcatccgcatctcagccaggtatatacgg
tttccatatgatgcagtaaaccaagcaaacatcaaagcgcaatttgcagcgatagccggt
tttcccaatgtaatcggagcgatcgactgcacacacattgcaataaaggcgccatctgaa
ggggaatatgagtacgttaataggaaacacttccattccttaaacgtgcaaataatctgt
gatgcccaaatgcgccttacgaatatcgtggcaaggtggcctgggtcaacccatgattca
ttcgtcctgagaaacagctcggttgggaataggttggaggctggaagagtgtgtgatggg
tggctaattggagacagcggttacgccttacggccatggctgttaacccccctcgccaac
ccacagactgtccgagagcagagatataatgatatccatgcacgcactcggacagtcgtg
gtaagagcgatagggcagctgaagagccggtggcgctgccttgaccggagcgggggaatg
ctgctctatcaccctgaaaaggtgtgccgcattgtgcaggcatgtggggttctgcacaat
gttgcgcacaggcacggcgtgccattacgcgaggtaatggacctcccagaagacccagac
cccggaccaaacaatgcgcagcccaatgtagaggccattcgaatccggcagcagttaata
ggcagaatataa
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