Gadus morhua (Atlantic cod): 115529373
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Entry
115529373 CDS
T10832
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Membrane trafficking [BR:
gmh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115529373 (sh3tc1)
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Gene cluster
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Other DBs
NCBI-GeneID:
115529373
NCBI-ProteinID:
XP_030193904
Ensembl:
ENSGMOG00000009869
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Position
17:complement(5958713..5977290)
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AA seq
1347 aa
AA seq
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MSTTKPRNGVGVHPDRRNMPVDDHQRHTELPMRRGTLATQRKTLERGLSRDTGSMLRSSC
LDEDSLPTALPMLLTMVEGPGRLPVDEDTQEVLRGKLRLLQPDSPEVIALFTELSSHIHS
ISSEENTILLMFKTFEEIWKFTTYYSLGFLDQCMESLLFDQKFWIQSLDRDDLGIEVSVP
EDSLHLMVKGLLMQEGSFFASCSSNQIFDSSTCGGDLYLEQGDVAQFEPPILGSGWSVLS
LNDGARGTTQKPALEPLIPFYQWFLKSCPENVLVGGGKPVCNFPLRFARGTCRALTEYHG
QGPDELSLAAGERVAVVGRLVSGFEWFLGRAEATGALGLVQTALVEPTDNLCESTDIYLD
AEERSFFCFKEESIIQETTALLKKNSQSDIGYVYKLDLIPQQDGVKLAKQRSSLELVDAD
ARLELKANMERILAPCRAPSPHRGTQSETESAADPVLRAPPPSPPPEAPCFTVHAPVEGT
PDGELFTPLLSFLEGAPYRREFAVLYGATADLLSSSLFAGHADEDALVAFLSVARETARK
RRLHWAQSRACFLLGLQCAGRSKFSQARVYLEEALAVPKEAFADVRLLAALYANLAHIHL
LQKNAEKYVAAAERLAAAAMALPECVASAKDHVAALQYALRKAVLTRNKMAEARACFVLA
KCHRLRGEDEATLPYVERLLELSAAAAAAEEGGSDGVPPSRVCLGLGRIYGALGRPLLSV
CAARRAASEPAATLGDCLGALALVLERRDEVSWLGGGEGALPCHAVTYLRRALALGEGPR
GDGGEEEGEGEGERHALSHALTLCLSGLLQRHGMDGHAVRVVRAFVDRRRRAPGLAAGEG
RSTLVWLAWLCIRDGQEDAALDVLDAIMQSPPSEHAATPQDGLVLNMRGIALRRQGHLQR
AAESYRAADDICEEFDDMSNWAVCQANFGLLCLKAGAKTLAERHLTRALELFSGLEQEGP
GLQLVHVLLELGRHYLEQGRLRYGQGCLEWALLLAIKAGLADCHLTATQQLCRLYGEVRP
DQARCIVYNEHQLPLLAAQGDRSREGDVLQAISEQYLSLGTAKAYRVALDCTKRSLGIFI
DLGQREQEAYAWLQAGKIYHMLGQKELVDLYIQVAQDVGLITGDTGFVLALLEAAGDIFH
NSSQDRDKAVCFYRDRALPIALKTGSEASRLRLCHKLVDLLLSLRRHDDAVEFAQTALDI
SITLEERLSERVAYHRLATIYQHLGQWELAEHHYLKALALCPAPLQFDEETLYYARVYQT
LGDIIFYDLKDPHDAAGYYHLALAAAMDLGNKRAQLRLCTRLATIYHNYLVDRQLSLCFY
QRARAFATELNVRRVDISASQRQISRR
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactactaagccgaggaacggtgttggggtccacccggaccgcagaaacatgcct
gtagacgaccaccagagacacaccgagctccccatgaggagggggacgctggccacccaa
aggaagacactcgagcgcggtctctccagggatactggaagcatgctgaggagctcctgc
ttagacgaggacagcttaccaacagctctgcccatgctgctgaccatggtggagggcccc
ggcagacttcctgtggatgaggacacacaggaagtgctgagagggaagcttcgccttctg
caacctgacagcccagaggtcatcgctctgttcacggagctgtcgtctcacatccactcc
attagcagtgaagaaaatacgatattgctgatgttcaaaacatttgaggagatatggaag
tttacaacatattactcattaggctttctggaccagtgcatggagagtctcttattcgac
cagaagttctggatccagtccctggaccgggacgacctgggcatcgaggtgtcagtgcct
gaggactcccttcatctcatggtcaaaggtctcctgatgcaggaaggctccttcttcgcc
agctgctcctccaaccagatctttgacagctccacctgcggaggggacctgtacctggag
cagggggacgtggcccagttcgagccccccatcctgggctcgggctggagcgtgctgtcc
ctgaacgacggagccagggggaccacacagaaacccgcactagagcccctcatccctttc
tatcaatggtttcttaagtcctgcccggagaacgttctggtgggcggtgggaagccggtc
tgcaactttccccttcgcttcgcccgggggacctgtcgggccctcacagagtaccacggc
cagggcccggacgagctcagcctggcggccggggagcgcgtcgccgtggtggggcgcctg
gtgtccgggttcgagtggttcctggggagggcggaggccacgggagcgctggggttggtg
cagacggccctggtggagccgacggataacctttgtgagtcaacagatatctacttggac
gcagaggaaaggagcttcttctgcttcaaagaggagtccatcatccaggagaccaccgcg
ttgctgaagaagaactctcagagtgacatcggctacgtctacaaacttgatttgattccc
cagcaagatggtgtgaaattggccaaacaaagaagttcactggagctcgtcgacgcggac
gctcgcctggagttaaaagccaacatggagaggatcctggcgccatgccgggcgccatca
ccccaccgcgggacgcaaagtgaaaccgagagcgccgctgaccccgtccttcgggctccg
cccccctcgccccctcccgaggcgccgtgcttcacggtccacgcgcccgtcgaaggaacc
ccggacggcgagctcttcacccccctcctctccttcctggagggcgccccctacaggcgg
gagttcgccgtcctctacggtgccaccgccgacctcctctcctcctcgctcttcgcgggc
cacgccgacgaagacgcgctggtcgccttcctgagcgtcgcccgggagacggcccgcaag
cgccggctccactgggcccagagccgcgcgtgcttcctgctgggcctgcagtgcgccggg
aggtcaaagttcagccaggcgcgggtgtacctggaggaggcgctcgccgtgcccaaggag
gccttcgccgacgtgaggctgctggccgcgctctacgccaacctggcccacatccacctc
ctccagaagaacgccgagaagtacgtcgccgcggcggagcgcctggcggcggccgccatg
gccctgccggagtgcgtggcgagcgccaaggaccacgtcgcggcgctccagtacgccctg
aggaaggcggtgctcactcggaacaagatggcggaggcgcgcgcttgcttcgtgctcgcc
aagtgtcaccgtctccggggcgaggacgaggccaccctgccctacgtggagaggctcctg
gagctgtccgcggcggcggcggcggcggaggagggggggtccgacggcgtcccccccagc
cgcgtgtgcctcggcctggggaggatctacggcgcgctgggccggcccctcctcagcgtg
tgtgcggcgaggagggcggcgtcggagcccgccgccacgctgggcgactgcctgggcgcg
ctcgcgctggtgctggagagacgggacgaggtctcgtggctggggggcggggagggggcg
ctcccgtgtcacgccgtgacgtacctacgccgcgccctggcgttgggcgaggggccgagg
ggggacggcggggaggaggagggggagggggagggggagaggcacgcgctgagtcacgcg
ctcacgctctgcctctccgggctgctccagaggcacgggatggacggccacgccgtccgc
gtcgtgcgcgccttcgtcgaccgccggcgccgcgccccgggcctggccgcgggggagggc
cgcagcaccctggtgtggctggcctggctctgcatccgcgacgggcaggaggacgccgcg
ctggacgtgctggacgccatcatgcagtcccccccgtcggagcacgccgccacccctcag
gacggcctggtcctcaacatgcgaggcatcgcgctgcggcgccagggccacctgcagagg
gcagcagagagctaccgggcggccgacgacatctgcgaggagttcgacgacatgtccaac
tgggccgtgtgtcaggccaacttcgggctgttgtgtctgaaggccggggcgaagaccctg
gcggagaggcacctgacccgggccctggagctcttctctggcctggagcaggaggggccg
gggctgcagctggtgcacgtgctgctggagctggggcggcactacctggagcagggccgg
ctgcgctacggccagggctgcctcgagtgggctctgctgctggccatcaaggccggcctg
gccgattgccatctcacagccacgcagcagctgtgccgtctgtatggagaggtccgcccc
gaccaggcgcggtgcatcgtctacaatgaacaccagctccccctgctggccgcccagggg
gaccgcagccgtgagggggacgttctgcaggccatcagcgagcagtacctttctctgggc
acagctaaggcgtaccgggtggcgctggactgcaccaagaggagcctgggtatcttcatc
gacctgggccagcgcgagcaggaggcctacgcgtggcttcaggcggggaagatctaccac
atgctgggccagaaggagctggtggacctgtacatacaggtggcccaggacgtgggcctg
atcacaggggacaccggcttcgtcctggctctcctggaggcggccggggacatcttccac
aacagctcccaggaccgagacaaggccgtctgcttctaccgggaccgcgccctgcccatc
gccctgaagacgggcagcgaggccagtcgtctgcggctctgccacaagctagtggacctg
ctgctcagcctccgtcgccacgacgacgccgtggagttcgcccagaccgcgctggacatc
agcatcactctggaggagcgtctgagcgagagggtggcgtaccaccgcctggccaccatc
taccagcacctgggccagtgggagctggccgagcaccactacctgaaggccctggccctc
tgcccggcgcccctgcagtttgacgaggagaccctgtactacgccagggtgtaccagacg
ctgggcgacatcatcttctacgacctgaaggacccccacgacgcggccggctactaccac
ctggcgctggcggccgccatggacttgggcaacaagcgcgcgcagctgcgtctgtgcacg
cggctcgccaccatctaccacaactacctggtggaccgccagctgtcgctgtgcttctac
cagcgggcgcgcgccttcgccaccgagctcaacgtgcgcagggtggacatctcggcgtcg
cagcgtcagatctcgcgccggtga
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