Gadus morhua (Atlantic cod): 115529458
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Entry
115529458 CDS
T10832
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115529458
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115529458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
115529458
NCBI-ProteinID:
XP_030194063
Ensembl:
ENSGMOG00000034003
LinkDB
All DBs
Position
17:complement(5896897..5902223)
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AA seq
333 aa
AA seq
DB search
MYSMMEHELKPTGQPQSHQTSQGMSPVPGNMTGGMGGNGGSHPGSKTACPPGADPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPMLKKDHHGHGGPGGVVVHGKYPLSAGNLLAAAQGQGQGQGGGGS
PRVDGYGWGHAAGGYAGMQGDALGYTQQLHRYDLSALQYPPAMAPQSYMNGGNAYSPMSY
GSSPQQHSPVTMSMVKPEPMSHSPPTGPASGHHHHHHHRGPLQGDLRDMISMYIPGGDGG
DPTGAAAAAAAAQRGYTSVQQHYLGGTVPLTHI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcacgagctgaagcccacgggtcagccccagtcccaccagacg
tcccagggcatgtccccggtgccgggcaacatgacgggcggcatgggcggcaacggcggc
tcccacccgggctccaagacggcgtgccccccgggggccgaccccatggacaaggtcaag
cggcccatgaacgcgttcatggtgtggtcccgaggtcagcggcgcaagatggcacaggag
aaccccaagatgcacaactccgagatcagcaagcggctgggcgccgagtggaagctgctc
accgacgccgagaagcggccgttcatcgatgaggccaagcgtctgcgcgccgtgcacatg
aaggagtacccggactacaagtacaagccgcggcgcaagaccaagcccatgctgaagaag
gaccaccacgggcacggcggccccgggggggtggtggtgcacggcaagtacccgctgtcc
gccggcaacctgctggcggcggcgcaggggcagggccaaggccagggaggaggcggcagc
ccccgggtggacggctacggctggggccatgccgcaggggggtacgccggcatgcagggc
gacgcgctgggctacacgcagcagctgcaccgctacgacctgtcggcgctacagtacccg
cccgccatggcaccacagtcctacatgaacggcggcaacgcctacagccccatgtcgtac
ggcagcagcccccagcagcacagccccgtcaccatgtccatggtgaagcccgagcccatg
tcccactcgccgcccacggggcccgcgtccggccaccaccaccaccaccaccaccgcggg
cccctccagggggacctcagggacatgatcagcatgtacatccccgggggggacggcggg
gaccccacgggggccgccgccgccgccgccgccgcccaacgtggctacaccagcgtccag
cagcactacctcggaggcaccgtcccgctcacgcacatctag
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