Gadus morhua (Atlantic cod): 115529556
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Entry
115529556 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-1-like
KO
K07377
neurexin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115529556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115529556
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
115529556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Syndecan
EGF
Motif
Other DBs
NCBI-GeneID:
115529556
NCBI-ProteinID:
XP_030194187
Ensembl:
ENSGMOG00000011867
LinkDB
All DBs
Position
17:complement(11060019..11671223)
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AA seq
1653 aa
AA seq
DB search
MTRAVPSLRWPLWPLALLHLLTAVSTLEFGGAPGQWARYSRWEAGSVGELSFSLKTNISK
ALVLYLDDGGNCDFMELLVAGGRLHLRFAIHCAEPASLHMETPVDDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLK
VGEMPPALLNSMGIQSDLEYMCTKQNPCLNGGFCSIQYGEVHCDCTQTRYKGKYCKEAEE
YAVEGDSSQVGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTQQRNGLMLHTGKS
ADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMV
TISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNND
FKLELSRLAIDRDPKITLNGDLVFRCEDVAALDPITFETPESFVALPKWNTKKTGSISFD
FRTTEPSGLLLFSHGRPQGPKEQKPGRELKTDYFAMELLDGYLYLLIDMGSGKTKLKTSN
KKVNDGEWCHVDFQREGRKGSISVNSRSLPFSSPEGSEILDLDGDMYLGGLPETRAELVL
PPEVWTALLNLGYVGCVRDLFIDGKSRDVRRLAEIQSAMGVSSFCTREQQKRCGPCGNAG
GHCKEGWNRYICDCTGTGYLGGNCEIEATVLSYDGSMYLKVITPLALHTEAEDVALRFMS
QRAYGLLMATTSRESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPETLFAGQKLNDNE
WHAVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFISVVPSNFIGHL
QGLTFNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLALATLQAYASMHL
FFQFKTTTPDGLMLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGNSDKPLNDNQWH
NVVVSRDAGNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVIKTMYGNLPKLIASRDGY
QGCLASVDLNGRLPDLMADALHSVGQVERGCDGPSTTLRRSPATNQGVWLQQWEGFSCDC
TRTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLKEAVLVRVE
SAKGLGDYLELHIERGKVGVIFNVGTDDIAIEESAVAVSDGKYHVVRFTRSGGNATLQVD
NQPVIERFPSGRQLTIFNSQAFIKIGGGSGGEKGRHFQGQISGLYYNGLQVLKLAAEGDA
NVQSQGNLRLVGDVPSVLTTDTTASSTTPALADMSTTIMETTTTMATTTTRKQRSPTMRD
SVTQNTDDLLVASAECPSDDEDLEECEPGNGGELVLPIITVDSLDPPSIATRYPVVPPPP
TTYRPFLTLLETTKETLSLPNHVPARAPCPLDHEDCEEPIEVSAYGSGEMTESDDEDYFK
NSPLVTDRTVLPPPPAAQNPRDRHSSRVPDPHRPPLPSTPTADPDHLGPRPKPPNANPGG
NANIPAGKMNTRDQVLLPPPPPAHPSSSDPGQRRHPAGGVTHPPNFPHVPTADPTSPERG
LPGAVEVQQSSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSAA
TQSSNGTLVKEKQAGAAKTVTKNKKNKDKEYYV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgacgagggctgtgccgtccctgcgctggcccctgtggcccctggccctgctccacctg
ctcaccgcggtgagcacgctggagttcggcggcgcgccgggccagtgggcgcgctacagc
cgctgggaggcgggctccgtcggcgagctgagcttcagcctgaagaccaacatcagcaag
gcgctggtgctctacctggacgacggcggcaactgcgacttcatggagctgctggtggcc
ggcgggcgactccacctgcgcttcgccatccactgcgccgagcccgcctccctgcacatg
gagacccccgtggacgacgaccgctggcacatggtgctgctcacgcgcaacttccgcgag
accctgctgatggtggacggcgagaccaaggtggcggaggtgaagtccaagcggaaggag
atggcggtggtcagcgacctgtttgtgggcggcatcccgcccgacgtgcgcctctcggcc
ctcacgtccagcacggtcaagtacgagcccccgttcctgggcctcatctccaacctgaag
gtgggcgagatgcccccggcgctgctcaacagcatgggcatccagagcgacctggagtac
atgtgcaccaagcagaacccctgcctcaacgggggcttctgctccatccagtacggcgag
gtgcactgcgactgcacccagacgcgctacaaagggaaatactgcaaggaagcagaggag
tatgctgttgaaggagactcatcgcaagttggcaaggaggagtcggtggccaccttcaag
ggcaacgagttcttctgctacgacctgtccctgacgcccatccagagcagcacggacgag
atcacgctctccttccgcacacagcagcgcaacggcctcatgctgcacacgggcaagtcg
gccgactacgtcaacctgtcgctgaagagcggcgccgtgtggctggtcatcaatctgggc
tccggggccttcgaggcgctggtggagcccgtcaacggcaagttcaacgacaacgcctgg
cacgacgtgcgcgtcactcggaacctgcgccagcacgcaggcatcggacacgctatggtg
accatttcggtggatggtatactgaccaccaccggctacacccaggaggactacaccatg
ctgggctccgatgacttcttctacatcggggggagccccaacacggccgacttgcctggg
tcccccgtcagcaacaacttcatgggctgcctcaaggatgtggtgtacaaaaacaacgac
ttcaagctggagctgtcccgcctggccatcgaccgcgaccccaagatcacgctgaacggc
gacctggtgttccgctgcgaggacgtggccgccctggaccccatcaccttcgagaccccc
gagtcgttcgtggcgctgcccaagtggaacaccaagaagacgggctcaatctccttcgac
ttccgcaccaccgagcccagcggcctgctgctcttcagccacgggcggccccagggtccc
aaggagcagaagccgggccgggagctgaagacggactactttgccatggagctgctggac
gggtacttgtacctgctcatagacatgggctccggcaagaccaagctgaagaccagcaac
aagaaggtcaacgacggggagtggtgccacgtcgacttccagcgggagggccggaaaggc
tccatctcggtcaacagccgcagcctccccttcagctcccccgagggcagtgagatcctg
gacctggacggggacatgtacctgggcggcctgcccgagacgcgcgccgagctggtgctg
cccccggaggtgtggacggccctgctcaaccttggctacgtgggctgcgtgcgggacctc
ttcatcgacggcaagagccgggacgtgcggcggctggccgagatccagagcgccatgggc
gtgagcagcttctgcacccgggagcagcagaagcgctgcggtccctgcgggaacgccgga
ggacactgcaaggagggctggaaccgctacatctgcgactgcaccggcaccgggtacctg
gggggaaactgtgagatagaggccacggtgctgagctacgatggcagcatgtacctgaag
gtcatcaccccgctggcgctgcatacggaggcggaggacgtggcgctgcgcttcatgtcc
cagcgcgcctacggcctcctcatggccaccacgtcccgcgagtccgccgacaccctgcgc
ctggagctggacggcggccgcgtcaagctcaccgtcaacctggattgtatcaggatagac
tgtaacctcagcaaggggccggagacgctgttcgcaggacagaagctcaacgacaacgag
tggcacgccgtcaaggtggtgcggaggggcaagaacctccagctgtcagtggacaacgtc
acagtggaaggccagatgacgggcgcccacacccgcctggagttccacaacatcgagacg
ggcatcatgaccgagcgccgcttcatctccgtggtgccgtccaacttcatcggccacctg
cagggcctcaccttcaacggggtgccctacctcgaccagtgcaagaacggtgacatctcc
tactgcgagctcaacgcccgcttcggcatgcgccacatcatcgctgaccccgtgaccttt
cggaccaagggcagctacctggcgctggccacgctgcaggcctacgcctccatgcacctc
ttcttccagttcaagaccaccacgcccgacggcctcatgctcttcaactcaggcgacggc
agcgacttcatcgtggtggagctcgtcaagggctacgtccactacgtgttcgacctgggc
aacgggccgtcgctgatgaagggcaactcggacaagccactgaacgacaaccagtggcac
aacgtggtggtgtcccgggacgccggcaacgtgcacacgctcaagattgactcgcgcacc
gtgacacagcactccaatggagcacggaacctggacctcaaaggggagctgtatatcggt
ggagtgatcaagaccatgtacggcaacctgcccaagctgatcgcgtcccgggacggctac
cagggctgcctggcctcggtggacctcaacgggagactgcccgacctgatggcggacgcc
ctccacagcgtgggacaagtggagcgaggctgcgacggacccagcaccaccttacggagg
agtcctgctacaaaccagggcgtgtggctccaacagtgggagggcttcagctgcgactgc
accaggacgtcctatggaggctccttctgcagcgaccctgggacgacctacatcttcggt
cgtggcggagccctcatcacctacacctggccccccaacgaccggccgagcacgcgggcc
gaccggctggccgtgggcttcagcacgcagctgaaggaggccgtactggtcagggtagag
agcgccaagggactgggagactacctggagctccacatagagcgggggaaggtcggcgtg
atcttcaatgtgggcacggacgacatcgccatcgaggagagcgcggtcgccgtgagcgac
ggaaagtaccacgtggtgcgcttcacgcgcagcgggggcaacgccacgctacaggtggac
aaccagcccgtcatcgagcgcttcccctcaggccgacagttgaccatcttcaacagccag
gcgttcatcaagatcgggggtggcagcggcggcgagaagggccgccacttccagggccag
atctcggggctgtactacaacggcctgcaggtgctgaagctggcggccgagggcgatgcc
aacgtgcagtcgcagggcaacctgcggctggtgggcgacgtgccctcggtgctcaccacc
gacaccaccgcgtcgtccaccacgcctgcgctggccgacatgtccaccaccatcatggag
accaccaccaccatggccaccaccaccacgcgcaagcagcgctcgcccaccatgagagac
agtgtcacgcagaacacagatgacctactggttgcgtcggccgagtgtcccagcgacgat
gaggacctagaggagtgtgaacccggaaacggaggtgaattagtgttgcccataattacc
gtggactccctagaccccccgtccatcgcgacgcgctacccggtagtccccccgcccccg
accacgtatcgccccttcctcaccctgctcgagaccaccaaagagaccctgtccctgccc
aaccacgtccccgcgcgggccccctgccccctggaccacgaggactgcgaggagcccatc
gaggtgtcggcgtacggctcgggcgagatgaccgagtcggacgacgaggactatttcaaa
aactcgccgctcgtcaccgaccggacggtcctccccccgccgcccgccgcccagaacccc
cgcgaccgccactcctcccgcgtccccgacccccaccgcccgcccctcccctccaccccc
accgctgaccccgaccacctcggcccgcggcccaagccccccaacgccaaccccggcggc
aacgccaacatccccgccgggaagatgaacacccgggaccaggtgctgctgcccccgccg
ccgccggcccacccgtcctcctccgacccgggtcagcggcgccaccccgccggaggggtg
acccacccgcctaacttcccccatgtgcccaccgcagatcccacgtcccccgagcggggc
ctgcccggggccgtggaggtgcagcagtccagcagcaccaccggcatggtggtgggcatc
gtggcggccgccgccctctgcatcctcatcctgctctacgccatgtacaagtaccgcaac
cgcgacgagggctcctaccaggtggaccagagccgcaactacatcagcaactcggccgcc
acgcagagcagcaacggcacgctggtgaaggagaagcaggcgggcgccgccaagacggtc
accaagaacaagaagaacaaggacaaggagtactacgtctga
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integrated database retrieval system
