Gadus morhua (Atlantic cod): 115529557
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Entry
115529557 CDS
T10832
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115529557 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115529557 (sf1)
Spliceosome [BR:
gmh03041
]
Complex A
Other components
Complex A specific factors
115529557 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
115529557
NCBI-ProteinID:
XP_030194188
Ensembl:
ENSGMOG00000007469
LinkDB
All DBs
Position
17:7250770..7261466
Genome browser
AA seq
729 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFESGPGAGNGLMPTPGPPAAFPAPQTFQPPMPTVSFPA
PSQFNTVATFPVPPQQLSPVAVAMSKADLGQKKSRKRSRWSCETPDQKTIIPGMPTVIPP
GLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKLEEERHSLITEMVGLNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFTAQRATPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHS
HQGGGNRSNNSNNSQQNRPPWMNSGPSESRNYHGGMHGGGHGGGHGGGHGGGHGGHGGNH
GGNHGGGHGGNHGGNHGGNHGGGHGGGHGGGHGGGHSLGHGGHHGYPPPMSNMGGPPMSH
NPNGIPPPWMQPPPPPMGQGHGHHMGLLPPPMGMMPPPPPPPSNQPPPPPSGPLPPWQQQ
APPPPPTSSMASSASLPWQQNTTTTSSAASGSLPPWQQPQQSAAAGPQPPPPMTNPSMVP
PPPGVQPPLPPGAPPPPPPPPPGSSGMMYAPPPPPPPMDPSNFVTMMGMGVPGMPPFGMP
PAPPPPPPN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggagcaaacgcgacccctttggggaagctgcatcctagtattggcgctaaa
cgaggatttgagtccgggcctggagctggaaatggactcatgccgactccggggccgccc
gcagcctttccagcgccgcagactttccagccgccaatgcccactgtcagctttcccgca
ccaagtcagttcaatacggtggcaacattccccgttccaccgcagcagctatctcccgtg
gccgtggcaatgtcaaaagcagatttaggccagaagaagtcgaggaagaggagtcggtgg
agttgtgagacgcccgaccagaagaccattatccccggcatgcccacggtcattcctccc
ggactgacccgagatcaagagagagcatatatagtccaactgcagatcgaagacctgact
cgtaaactgcgtacaggagacctgggaattcctgttaaccctgaggacaggtccccctct
cccgagcccatctacaacagcgagggcaagaggctgaacacccgcgagtaccgcacccgc
aagaagctggaggaggagcgccactcgctcatcacggagatggtcggcctcaacccagag
ttcaagccccccgcggactacaaacccccggcgaccagagtcaacgacaaagtcatgatc
ccccaggatgaataccctgagatcaactttgtggggctgttgattggacctcgtggtaac
accctgaagaacatcgagaaggagtgctgcgccaagatcatgatccgcggcaagggctcc
gtgaaggagggcaaggtgggccgcaaggacgggcagatgctgcccggggaggacgagccg
ttgcacgccctggtcacagccaacaccatggagaacgtcaagaaggccgtggagcaaatc
cgcaacatcctgaagcagggcatcgagacgccagaggaccagaacgacctgaggaagatg
cagctccgcgagctggcccggctcaacggcacgctgcgagaggacgacaacaggatcctg
cgtccatggcagaactctgagccgcgcagcatcaccaacaccacgctctgtaccaagtgt
ggcggggcagggcacatctcgtctgactgcaagtacaccagctcgttcaccgcccagagg
gccacgcccggagagccccctcagtcggcccaggacaaggcccgcatggacaaggagtac
ctgtccctcatggcggagctgggggaggcgcccgtgccgtcgtccggcgggggacactcg
caccaagggggcggcaaccgctccaacaactccaacaactcgcagcagaaccgtcctcca
tggatgaactctggtccctctgagagccggaactaccacggcggcatgcatggaggaggg
cacggcgggggccacggaggaggccacggaggaggccacgggggccacggcgggaaccac
ggcgggaaccacggagggggccacggcgggaaccacggagggaaccacggcgggaaccac
ggcgggggccacggaggcggtcacggcgggggccacggtggcggccattcactagggcac
ggcgggcaccacggctacccgccgcccatgtccaacatgggaggaccccccatgtcccac
aaccccaacggcatcccgcccccatggatgcagcccccgccgccccccatgggccagggt
cacggacaccacatgggtctgttgccccctcccatgggcatgatgcccccacctccccca
cctccgagcaaccagccccccccaccgccctctggacccctgccaccgtggcaacagcag
gccccgcctcccccgccgaccagcagcatggcgtccagtgcgtccctgccatggcaacag
aataccaccaccacctccagcgcggccagcggctccctgcccccctggcagcagccccag
cagtcggccgccgccggcccccagccgccgccgcccatgaccaacccgtccatggtcccg
cctccgccgggcgtccagccgccgctgcccccgggtgcaccgcctccccccccgccgcct
ccgcccggctccagcggcatgatgtacgcgccgccccctcccccaccgcccatggacccc
tccaactttgtcaccatgatggggatgggggtcccaggcatgccccccttcggcatgcct
ccagcgccaccccctccacccccgaattaa
DBGET
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