Gadus morhua (Atlantic cod): 115529572
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Entry
115529572 CDS
T10832
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh02010
ABC transporters
gmh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115529572
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115529572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115529572
Transporters [BR:
gmh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115529572
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
ABC2_membrane_2
HAM1_N
Motif
Other DBs
NCBI-GeneID:
115529572
NCBI-ProteinID:
XP_030194230
Ensembl:
ENSGMOG00000015048
LinkDB
All DBs
Position
17:complement(1929823..2086603)
Genome browser
AA seq
2221 aa
AA seq
DB search
MALLMTQFTLLLWKNFTLRRRQKVRLLVEILWPLFLFIILVGVRTTNKPVFKSQCHYPNK
AMPSAGVLPWLQGIICNLDNPCLEYPTPGEAPGQVNNFNNSVVAGFLIEFQDMLVNRSFL
SNVGMLVNDLDQWDAVSSNINGQSVPLRSLLNDDENFSVYLRDELSVPPPVVQSLMKANV
TINPMMAVAGDPRSVLCEGTAPLDEFIQFQSQAEKEAFVNVSCSLEPQQLREGQRMFLQN
LDQTKLLTMVASTVDASPAQTAQLVQSTVMHVGPVLREFARLQQSAAFQAARSLDFRANM
MGSINLMLCGKTVDFNSTNATRPRINARETTASVWNSSTNSSGFCETLITTLEETPGLRY
LWGALRPLVQGKVLYTPDTPAARLLVTQANATFNALATLKELSDSWEEVGPRIWTFLNSS
SIVEQLRVSLEDPVFAAFLDQQLNGTGLSSALIAGFLYNGPPEERPPGGPQSDWRDVYRA
AGQAAAMFSQLLGCLDLNKFEPASTEQQLVSRALELLEEERFWAGVVFENLPPNTTRLPA
YVKYTIRMDIDEVERTDEVKRRSWSPGAKDNIFNDLRYIWGGFAYLQDMLDSGVARAHGS
TPLVGVYAQQMPYPCYVNDGFIGSIGVTLPMFFVLAFTYSVCMAVKSLVLEKELGLKEVL
RSTGVPNGALWCAWFTENMTLLLVPCLLLSVMLKYGSVLYYSDPTLVFVFLLAFCTATVT
QCFLISVFFSKANLAAACAGLVYFVLYLPYVLCYAWKDSMRFGAKVAVSLLSCVAFGYGC
ENLSKYEEQGLGIQWSNIAQSPEEGTRYSFLVSILMMLLDALLYWTLTCYIENVFPGQYG
IPKPWYFLVTRSYWCGTTAAASTVHPDTLKNPGVQNGYLEKPPPDMKAGVSIQNLVKIYK
TGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALIHGLDIHTDMD
AIRKHLGMCPQHNVLFNDLTVEEHVYFYARLKGLSRAEVAAEMDQMIADVGLPHKRKDLS
KNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHH
MDEADILGDRIAIISHGKMRCCGSSMFLKKVFGRGYYLTLVRGGNQHTTAQRGQQPHAAQ
EKEARSGSSSSDEGIGSQTWINSDPSDVAAVGVLVRRHVPGAVYLESIGQEVTFILPYAG
AKDGSFATLFKDLDLEMGTLGLTSYGISDTTLEEIFLKVAEDTGVDVETQEKDEQNNSNG
NGAIRRDSEKASDLKGHTTNKVEDPKMAGVPDGKGSAVVGGSELIRRQFLALFVKRFHHA
RRSRKGLIAQVVMPVVFVCMCLIFSLIAPPFAEYPRLELQPWMYGLQTTFFSNDQPKNLA
VNRIVDSLVNNPGFGTRCMPGNPIPNLPCVPQSSDWFTPQVDQSVIDILANTTLADPSPS
CQCSTPQRTVMLPDCPPGAGGMPPPRRVQDTTDTLLNLTGRNVTDFLLKTYENQGKTRYG
GISVGESNSQASLTESQIQSAFAELRTILKTSQDNVTRQIVQNLETLLTELGRKENLKVW
FYNQGWHGVVSFLGVADNAILRGGLNDSLDRRSYGLSVSSHPLNLTKEQLSYVFLAATST
NLVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPSIYWVANFAWDMCNYAVP
CVIVILIFLCFQQEAYVSPPNLPALVLLLFMYGWAITPMMYPFTFIFSVPSTAYVVLTCI
NLFIGINGSVATFFMELFDDESVARINDIVKQVLLIFPHFCLGRGLIDMAKNEAMANLYS
SFGEDRFKDPLGWDMVGRNLCAMAIQGAVMFIFTLLIQYNFFCKPRAAGGKSLSQDQEED
EDVALERQRVLQGPAQQEDLLRIIDLTKVYPGKKTPAVDRVCVGIPAAECFGLLGINGAG
KTTTFKMLTGDIPVSGGEAYLNGYSIRSEMSLVHQNMGYCPQFDGIDDLLTGREHLQFYA
RLRGVPEKEVAMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTAMALIGCPPVIFLDEP
TTGMDPKARRFLWDCILSILKDGRSVILTSHSMEECEALCTRMAIMVNGRFKCLGSIQHL
KSRFGDGYTVVVRVGGSPPALAPVEHFIQEGFPGCVLKEKHHNTLQYQLPYRQGALAAVF
GQFTRRQQQLGIEDYSVSQTTLDQVFVNFAKHQHSDQEALKSYEQPVDLSDEIALRSVEQ
V
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atggctctcctgatgacacagttcactctcctcctctggaagaacttcactctccgcagg
aggcaaaaggtgcggctgttggtggagatcttgtggcctctgttcctcttcatcatcttg
gtgggtgtgcgtaccacgaacaagccggtgttcaagagccaatgtcactaccccaacaag
gccatgccctcggcaggggtgctgccctggcttcaaggaatcatctgcaacctggacaac
ccctgtctcgaataccccacgcccggagaggccccgggccaggtcaacaacttcaacaat
tctgtagttgcaggtttcttaatcgagttccaggacatgctggtcaacaggtcgttccta
agcaacgtgggaatgctggtgaacgacctcgaccaatgggacgcagtctcctccaacatt
aacggtcagtcggtgcctctgaggagtctcctgaacgatgacgagaacttctcggtttat
ctgagagacgaactctctgtgccaccgccagtggtccagagtctgatgaaggccaacgtc
accatcaacccgatgatggctgtcgcaggcgacccgaggagcgtcctctgcgagggaact
gctcctctcgacgagttcatccaattccagagccaggcggagaaggaggcctttgtaaat
gtcagctgctccctggaaccccagcagctgagggagggccagcgcatgttcctccaaaac
ctggaccagacgaaactactcacaatggtggcttcgactgtggatgcgagcccggcgcag
accgcccagctggtgcagagcaccgtcatgcatgtgggtcctgtgttgagggagtttgcg
aggctgcagcagtctgctgccttccaggcggcccgctcgctggacttcagggccaacatg
atgggcagcatcaacctgatgctgtgcgggaagaccgtagacttcaactccaccaacgcc
acgcgcccacggataaacgccagggagaccactgcctccgtatggaacagcagcaccaac
tccagcggtttctgcgagaccctgatcaccaccctggaggagaccccgggcctgcgctac
ctttggggagcactacgccccctggtgcagggcaaggtgctgtacacccccgacacaccc
gccgcgcgcctcctcgtcacccaggcgaacgcgacgttcaacgccctggccacgctgaag
gagctgtcggactcctgggaggaagtgggccctcggatatggaccttcctcaacagcagc
tccatcgtcgaacagctccgggtgtccctggaggacccggtgttcgccgcctttctggac
cagcagctcaacggcaccggcctgagctccgcgctcatcgccggcttcctgtacaacgga
cccccggaggagcggccgccaggggggccgcagtccgactggcgcgacgtgtaccgagcc
gcgggccaggcggcggccatgttctcccagctgctcgggtgcctggacctgaacaagttt
gagccggcctccactgagcagcagctggtgagtcgagccctggagctgctggaggaggag
cgcttctgggctggggtggtgtttgaaaacctcccccccaacaccacccggctgcccgcc
tacgtcaagtacaccatccgcatggatatcgacgaggtggagcgcacagacgaagtcaag
cggaggtcgtggtcgcccggggcaaaggacaacatcttcaacgacctgcgctacatctgg
ggcggcttcgcctacctgcaggacatgttggactcgggcgtcgcccgcgcccacggcagc
acgccgctggtcggcgtgtacgctcagcagatgccgtacccctgctacgtcaacgacggc
ttcatcggcagcatcggcgtcacactgcccatgttcttcgtgctggcgttcacctatagc
gtgtgcatggcggtcaaaagcctggtgctggagaaagagctgggcctcaaagaggtgctg
cggtccaccggcgtgcccaacggcgcgctgtggtgcgcctggttcacggagaacatgacg
ctgctgctggtgccctgcctgctgctgagcgtcatgctgaagtacggcagcgtgctgtac
tacagcgacccgacgctggtgttcgtgttcctgctggcgttctgcacggccacggtcaca
cagtgcttcctgatcagcgtcttcttctccaaggccaacctggcggcggcgtgcgccggc
ctcgtctactttgtgctctacctgccctacgtgctgtgctacgcgtggaaggacagcatg
cgcttcggcgccaaggtggccgtgagcctgctgtcttgcgtggccttcggctacggctgc
gagaacctctccaagtacgaggagcagggcctgggcatccagtggtccaacatagcacag
agtccggaagaggggacgcgctacagcttcctggtctccatcctcatgatgctgctggac
gcgctgctgtactggacgctcacctgctacatcgagaacgtcttcccaggccagtacggg
atccccaagccgtggtacttcctggtcaccaggtcttattggtgcgggaccaccgccgcg
gcgagcaccgtccacccggacacgctcaagaacccgggggtccaaaacggttaccttgag
aagccaccgcccgacatgaaggcgggggtctccattcagaaccttgtgaagatctacaag
acggggaagaagctggcggtggacggcctcagcgtggacttctacgagaaccaaatcacg
tcgttcctgggtcacaacggagcggggaagaccaccaccatgtccatcctgaccgggctg
ttcccgcccacctcaggcaccgccctcatccacgggctggacatccacacagacatggac
gccatccgcaagcacctgggcatgtgcccgcaacacaacgtcctgttcaacgacctgacg
gtggaggagcatgtctacttctacgcccgtctgaagggactgagccgggccgaggttgcc
gcggagatggaccagatgatcgccgacgtgggccttccacacaaacgaaaggacctgtcc
aagaacctgtcaggagggatgcagaggaagctgtcggtggccatcgccttcgtcgggggg
tccaaaatagtgatcttggatgagccgacagcgggggtggacccctacgcccgccggggg
atctgggagctgctgctcaagtacaagcaaggccgtaccatcatcctgtccactcaccac
atggacgaggcggacatcctgggcgaccgcatcgccatcatctcccacggcaagatgcgc
tgctgcggctcctccatgttcctgaagaaggtcttcggccgcggctactacctgaccctg
gtgcgcggcgggaaccagcacacgaccgcgcagcgcggacagcagccgcacgccgcccag
gagaaagaggcccgatcggggagcagcagttcagatgaaggaatcgggagccagacctgg
atcaactccgatccatcagacgtggcggcggtgggcgtccttgtgcgccggcacgtcccc
ggcgccgtctacctggagagcatcggccaggaggtgaccttcatcctgccctacgcgggc
gccaaggacggctccttcgccacgctcttcaaggacctggacctggagatgggcacgctc
ggcctcaccagctacggcatctcagacaccaccctggaggagattttcctgaaagtggcc
gaggacactggagtagatgtggaaacacaagaaaaagatgagcagaacaattcaaacgga
aatggcgccatccgaagggattctgaaaaggcctctgatttaaagggacacaccactaat
aaagttgaagatccaaagatggccggcgttccggacgggaaggggtcggcggtggtcggg
ggctcggagctcatccggaggcagttcctggcgctgttcgtcaagcgcttccaccacgcg
cgtcgcagccgcaagggactcattgcgcaggtggtcatgccagtggtctttgtgtgcatg
tgcctcattttctccctgatcgccccccccttcgcggagtaccccaggctggagcttcag
ccctggatgtacggacttcagaccaccttcttcagtaacgaccagccgaaaaacttggcg
gtcaatcggatagtggattcacttgtgaacaatcctggtttcgggactcgctgcatgcct
ggaaacccaataccaaatctcccgtgcgtcccccagtcgtccgattggttcacaccgcaa
gtcgaccaatcggtgatcgacatcctggccaacaccaccctggctgacccctccccctcg
tgccagtgcagcaccccccagcggacggtcatgctgcccgactgcccccccggggctgga
ggaatgccccccccaaggagggttcaggacacgacagataccctgttgaatctaacgggg
cggaacgtgacagacttcctactcaagacctatgagaaccagggcaaaacaagatacggg
gggatttcagtgggagaatccaactcccaggccagtctcaccgagtcacagatccaatct
gcttttgcggaactccggacaatattgaagacgtcccaggacaatgtgactcgtcagatc
gtccagaacctcgagactctgctgacggagcttgggagaaaggagaacttgaaggtgtgg
ttctacaaccagggttggcacggggtggtgtccttcctgggcgtggccgacaacgccatc
ctaaggggcgggctgaacgacagcctggaccggcggagctacggcctctcggtctccagc
cacccgctcaacctcaccaaggagcagctgtcctacgtcttcctggcggcgacctccacc
aacctggtggtgtccatctgcgtcatcttcgccatgtccttcatcccggccagcttcgtc
ctcttcctcatccaggagagggtgaacaaggccaagcacctgcagttcgtcagcggcgtc
aaccccagcatctactgggtggccaacttcgcctgggacatgtgcaactacgcagtgccg
tgtgtcatcgtgatcctcatcttcctctgcttccaacaagaggcctacgtctcgccgccc
aacctccccgctctggtccttctgctcttcatgtacgggtgggccatcacccccatgatg
taccccttcaccttcatcttctcggtgcccagcacggcctacgtggtgctgacctgcatc
aacctcttcatcggcatcaacggcagcgtggccaccttcttcatggagctcttcgacgac
gagagtgtggcccgcatcaatgacattgtgaagcaagtgctattgatcttcccccatttc
tgcctgggtcgtggactcatcgacatggccaagaacgaggcgatggccaatctgtacagc
agctttggcgaagaccgctttaaagaccccctgggctgggacatggtggggaggaacctg
tgcgccatggccatccagggggctgtcatgttcatcttcaccctgctcatccagtacaac
ttcttctgcaaacccagggcggccgggggaaagtcattatctcaggatcaggaggaggac
gaggacgtggccctggaacgccagcgggtcctgcagggcccggcacagcaggaagacctg
ctccggatcatagatctcaccaaggtgtaccctgggaaaaagacccctgctgtggatcgg
gtctgcgtgggcatacctgctgcagagtgcttcggcctgctgggaatcaacggggcgggg
aagaccaccacctttaagatgctgacgggggacatcccagtctctgggggcgaggcctac
ctaaacggatacagcatccggtcggagatgagcctggtgcaccagaacatgggctactgc
ccccagttcgacggcatcgacgacctgctgaccggccgcgagcacctgcagttctacgcc
cggctgaggggggtgccggagaaggaggttgccatggtggccgagtggggaatccagaag
ttggggctggtgaagtactccaacaaatcagccggcacctacagcggggggaacaaacgc
aagctgtccaccgccatggctctgattggctgccctcccgtcatcttcctggatgagccg
accaccggaatggacccgaaggctcgccggttcctgtgggactgcatcctcagcatcctc
aaagatggccgctcggtgatcctcacgtcacacagcatggaggaatgtgaagccctgtgc
acacgcatggccatcatggtgaacggccgcttcaagtgcctcgggagcatacagcatctg
aaaagcaggttcggcgacggctacacggtggtggtgcgcgtggggggctcgccgcccgcc
ctggcccccgtggagcacttcatccaggagggcttcccgggctgcgtgctgaaggagaag
caccacaacacgctgcagtaccagctgccctaccgccagggggcgctggccgccgtcttc
ggccagttcacgcggcggcagcagcagctcggcatcgaggactactcggtgtcccagacc
acgctggaccaggtctttgtcaacttcgccaagcaccagcacagtgaccaggaagccctc
aaaagctacgagcagccggtggacctctccgacgagatcgccctgcgttcggtggagcag
gtctga
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integrated database retrieval system
