Gadus morhua (Atlantic cod): 115529573
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Entry
115529573 CDS
T10832
Symbol
pgap1
Name
(RefSeq) GPI inositol-deacylase
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
gmh01100
Metabolic pathways
Module
gmh_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
115529573 (pgap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115529573 (pgap1)
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
115529573 (pgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
Abhydrolase_6
PGAP1_2nd
Hydrolase_4
Abhydrolase_1
Lipase_3
Palm_thioest
Motif
Other DBs
NCBI-GeneID:
115529573
NCBI-ProteinID:
XP_030194231
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Position
17:18798465..18821465
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AA seq
938 aa
AA seq
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MRFSVFYGAALVLLVAGLRELLTGSEENRCSMTYMYEYPEYRRVTLPRRVSRLYPAYGLY
LYGEGLYAQETRALKLSGAPVLFLPGNAGSYKQARSLGSVALRKAESLDGGVHLNVFTVD
FNEELVALYGGSLRKQTLFLHECIKAVLRLYKGQERPPRSVVLVGHSMGGVVARALFTLP
RFSPPLVSLILTQASPHLAPVLALDTHLLGFYSAVRERWVRHADSLANVTVLSVGGGYRD
YQVRSGLTTLPCSPGDPNKLSLVATAVPRTWVSTDHLSIVWCKELVLATVRAFFDLIDPE
TNQFTDSVVRRMEVLHHHFIRHPVRMLDETPEAPLPLPDSPEAWNEVNALRLAYSAPKEG
QAKYFLFALSSRRKAYSHFYCRSNNMEMSSWVYGCVQKTGSMCVRAVDLSRGTELLPPYK
VLVLSLSDLSSVSHLVVAASNLNGKQFTVECEWQRQEAQTVSVSVPHVLSFGLTSSDVTV
NSSGLLHTVELEHFHQVYQSFRITVTSHCKVQKDRMANVYRMKVPWFREDFLTTASVPSV
TEISGMLHTSRPGNTSSALLQLHTAPNCQYKVLVRTSFPRVMGQVLRFCGPQLPVYMAVT
LLLACGGQLWSIARTGKPLEASQAVGWGLQPHKVGLPVYLLHLLLGCSQFQEAWSALGLP
AMDALPPTAPDHSTLEGGPVDEWPHLLGPLLYLLGATLAFWGSALLRLSLALLSLAAAPL
TRPSVAPDCGTLGRRRQALLLLVLSIVGGTSCGAVAIFSAFLIHLYRVVRLQMAERSLSH
MLNLAPEKNNGGEDNGAGTGAAPPGVYRQRNGGGALLSEGLLHQVKSDLQLHLSLSALFT
LAIMLSAPSLLHWARNLRYSPRLDPDSLWPHTLPLLAAMVLLIDCSCHALSHSKLLRVVC
HLPLPLCVAMVTFSPLHLYRLTYFLSAALVPLAVSCLL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctcggtgttctacggggcggctctcgtgctgctggtcgcggggcttcgcgag
ctgctgacggggtccgaggagaaccggtgcagcatgacctacatgtacgagtatccagaa
tacaggcgggtcaccttgccgcggcgtgtctccaggctgtacccggcctacggcctctac
ctgtacggcgagggcctctacgcccaggagacacgggccctcaagctgtccggggcccct
gtgctcttcctgcccgggaacgcaggaagctacaagcaagctcgctccctgggctcggtg
gcgctgaggaaggcggagagcctggatgggggggttcacctcaacgtgttcaccgtggac
ttcaacgaggagctggtggcgctgtacgggggcagcctgcgcaagcagaccctcttcctg
cacgagtgcatcaaggccgtgctgcgcctctacaagggccaggagcggccgccgcgctcg
gtggtcctggtgggccactccatgggcggagtggtggcccgcgcgctcttcaccctgccc
cgcttcagccccccgctggtcagcctcatcctcacccaggcctccccccacctggcccca
gtgctggccctggacacacatctgctgggcttctactctgcggtgcgggagaggtgggtg
aggcacgcggacagcctggccaacgtcaccgtgctgtcggtgggggggggttaccgtgac
taccaggtgcgctccggcctgacgaccctgccctgctccccgggagaccccaacaagctg
tctctggtggcgactgcggttcccaggacctgggtgtccaccgaccacctgtccatcgtc
tggtgcaaagagctggtcctggccacagtgcgagcgttctttgacctcatcgaccccgag
accaaccagttcacagacagtgtggtgaggaggatggaggtgctgcaccaccacttcatc
agacaccccgtcaggatgctggatgagaccccggaggcccccctccccctgccagattct
cctgaggcgtggaatgaagtgaatgcactgcgtctggcgtacagcgcccccaaggaaggt
caggcaaagtacttcctgtttgccctgtccagtcgcaggaaggcttacagccacttctac
tgtcgcagcaacaacatggagatgtccagctgggtgtatggatgtgtccagaagactggc
tccatgtgtgttcgtgcggtggacctgtcccgtggaacagaactcctacctccatataag
gtgctcgtcctgagcctcagcgacctgtcttctgtctctcacctggtggtcgccgcctca
aacctcaatggcaagcagttcacggtggagtgcgagtggcagagacaggaggcccagacc
gtgtccgtctccgtgccgcacgtcctctccttcgggttgacctccagtgacgtgacggtg
aactcctcgggactcctgcacaccgtggagctggagcacttccaccaggtctaccagtct
ttcagaattacggtcacaagccactgcaaagtacaaaaggatagaatggccaacgtgtac
cggatgaaggtgccatggttcagagaggacttcttaaccactgccagtgttccttctgtg
actgagatctcggggatgctccacaccagtcgcccgggcaacacctcctcagctctgctt
cagctgcacaccgccccaaactgccagtacaaggtgctggtgaggacctctttcccgagg
gttatgggacaggtcctgcggttctgcgggccccagctgcccgtgtacatggccgtaacg
ctcctgctggcctgcggggggcagctgtggtccatcgccaggaccgggaagcctctggag
gccagccaggccgtgggctggggcctgcagcctcacaaagtgggcctccccgtctacctc
ctgcacctgctgctggggtgcagccagttccaggaggcctggtcggcgctgggcctcccc
gccatggacgccctgccccccaccgcccccgaccactccaccctggagggggggcccgtg
gacgagtggccccacctcctcgggcccctgctgtacctcctgggggccacgctggcgttc
tggggcagcgccctgctgcgtctctccctggccctcctctccctggccgcggctcctctg
accagaccgtcggtggccccggactgtgggactctgggccggcggaggcaggccctcctc
ctcctggtcctcagcatagtgggcgggacttcctgtggggccgttgcaatcttcagtgcc
ttcctgattcacctctacagggtcgtccgtctacagatggctgaacgctctctgagtcac
atgctgaatctggcgccagagaagaacaacgggggggaggacaacggtgcggggacgggg
gcggcccccccgggggtctacagacagaggaacggcgggggggcgctgctgtcggagggc
ctcctgcaccaggtgaagagcgacctccagctccacctctccctgtctgccctcttcaca
ttagccatcatgctcagcgcgccctcgctgctccactgggcccgcaacctgaggtactct
ccccggctggacccagactcactctggccgcacactctgcctctgctcgctgccatggtc
ctgctcatcgactgcagctgtcatgcactgagccacagcaaactcctccgcgtggtttgc
cacctccccctgcccctctgcgttgccatggtgaccttctctccgctccatctctacaga
ttgacctacttcctgtccgcagcgctggtcccgctggccgtatcctgtctcctctga
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