KEGG   Gadus morhua (Atlantic cod): 115529772
Entry
115529772         CDS       T10832                                 
Symbol
sf3b2
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115529772 (sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmh03041]
    115529772 (sf3b2)
Spliceosome [BR:gmh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115529772 (sf3b2)
 Complex B
    115529772 (sf3b2)
 Complex C
   U2 SnRNP specific factors
    115529772 (sf3b2)
SSDB
Motif
Pfam: DUF382 PSP SAP TFIIA
Other DBs
NCBI-GeneID: 115529772
NCBI-ProteinID: XP_030194686
Ensembl: ENSGMOG00000012131
LinkDB
Position
17:complement(16112568..16125004)
AA seq 885 aa
MASDGPPGTESLPSDLGSAIVALNTWSHPELQAKLGELGAPNMGPREELIDRLKGYMIQT
GVLLSKPNDDKSMGPQMQGLPPMPPMPMPPLPPGMGMLQAMSMMSGGPPPPGMRMPPGLS
QEEQLKMAQQRAAMMIQQEERAKHQGDPRIMEEQELLEQQKRAAVLLEHERQQQMAKIHS
GPGGPDMGPRPPMMSSMSPGNPMRGMDPRGPLPPGVSMMPTQRQRVPPPPGEDGRESWQG
EESSVAGPKIPQALEKILQLKEMRQGQLTDPTEEEEEDDEGADTEMTGSSALGMSETDED
DGQLSKKDKNRKRRNRKKKNKKKRAQEKRELQGQEKPEADGDKDGEDKDKEKEDEVEIEY
VTEEPQIYDPNFIFFKRIFEAFKLTDDVKKEKEKEPEKTDQPLANLLKKKGFEEEKKDSD
DSDDDMRPDVSKLSKKKMRRMNRLTVAELKQLVARPDVVEMHDVTAQEPKLLVHLKATRN
TVPVPRHWCFKRKYLQGKRGIEKPPFELPEFIKRTGIQEMREALQEKEDAKTMKTKMREK
VRPKMGKIDIDYQKLHDAFFKWQMKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRIA
LGMPVGPNSHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPENCTFGYHAGGWGKPPVD
EMGKPLYGDVFGTNAGDFQAKAEEEEVDRTPWGELEPSDEESSEEEEEEESDEEKPDETG
FFTPADSGLITPGGLSSVPAGMETPELIELRKKKIEEAMDGNETPQLFTVLPERRTGAVG
AAMMASTHIYDISAAMAARKAGGGGGGGQESQGVEVALAPEELELDPMAMTQKYEEHVRE
QQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDNRGGAKKYKEFKF
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggcatccgatggcccaccgggcactgaatctctaccgtccgatttagggtctgccatt
gtagctttgaacacatggagccacccggagttgcaagccaaactgggggagctgggagca
ccaaacatgggtccaagagaggagctgatcgataggctcaagggatacatgatccagacg
ggggttctcctcagcaaacccaacgatgataaatccatgggccctcagatgcaggggctc
ccgccaatgccccccatgcccatgccgcccctgcccccgggcatgggcatgctgcaggcc
atgagcatgatgtccgggggtccgccgccacccggcatgcgcatgcccccgggcctctcc
caggaggagcagctgaagatggcccagcagcgggccgccatgatgatccagcaggaggag
agggccaagcaccagggggacccccgcatcatggaggagcaggagcttctggagcagcag
aagagggctgcggtgctgctggagcatgagaggcagcagcagatggccaagatacactct
ggccccggagggccggacatgggccccaggccacccatgatgtcctccatgtctccaggc
aaccccatgagaggtatggaccctcgtgggcccctccccccaggggtgagcatgatgccc
acccagagacagagggtccccccccctcccggagaggacggcagagagagctggcagggg
gaggagtcgagcgtggccgggcccaagatcccccaggcgctggagaagatcctgcagctg
aaggagatgcgacagggccagctcaccgaccccacagaggaggaagaggaggatgacgag
ggagccgacactgagatgacgggctcctccgccctgggcatgtcggagacggacgaagac
gacggacagctgtcaaagaaagacaaaaaccgcaagcgcaggaaccgcaagaagaagaac
aagaagaagcgtgcgcaggagaagcgggagctgcagggccaggagaagcccgaggcggac
ggagacaaggacggggaggacaaggacaaggagaaggaggacgaggtggagatcgagtac
gtgacggaggaaccgcagatctacgaccccaacttcatcttcttcaagaggatcttcgag
gcgttcaaactgacggacgacgtgaagaaagagaaggagaaggagccggaaaagacggac
cagcccctggccaacctgctgaagaagaagggcttcgaggaggagaagaaggacagcgat
gacagcgacgacgacatgaggcccgacgtgtccaagctctccaagaagaagatgaggagg
atgaacagactgacggtggccgagctcaaacagctggtggcacgccccgacgtggtggag
atgcacgacgtgacggctcaagagcccaagctgctggtgcaccttaaggccacgcgcaac
acggtgccggtgccgcgccactggtgcttcaagaggaagtacctgcagggcaagaggggc
atagagaagccccccttcgagctgcccgagttcatcaagcgcaccggcatccaggagatg
agggaggcgctgcaggagaaggaagatgccaagaccatgaagaccaagatgagggagaag
gtgcgtcccaagatgggcaagattgacatcgactaccagaagctccacgatgccttcttc
aagtggcagatgaagcccaagctcaccatccacggggacctttactacgaggggaaagag
tttgagacccgtctcaaggagaagaagccaggagatttgtccgatgagttgcgcatcgct
ctgggaatgcccgtcggaccaaactcccacaaggtgcccccaccctggctcatcgccatg
cagcgctacggaccaccgccctcgtaccccaaccttaagatccccggcctcaacgccccc
atcccagagaactgtacgtttggctaccatgccggcggctgggggaagccgcccgtggac
gagatgggcaagcccctgtacggagacgtgtttggcaccaacgctggagacttccaggcc
aaggccgaggaggaggaggtggaccgcaccccctggggggagctggagccctcggacgag
gagtcctccgaagaggaggaagaggaggagagcgacgaggagaagccagacgaaaccggc
ttctttaccccagcggacagcgggctgatcaccccaggaggcctgtcgtccgtccctgcc
ggcatggagacgcccgagctgattgagctgaggaagaagaagatcgaggaggccatggac
ggcaacgagacgccccagctgttcaccgtgctcccagagaggcggacgggcgctgtgggg
gcggccatgatggcatccacgcacatatacgacatctcggcggccatggcagcgcgtaag
gcagggggcggtgggggcggcgggcaggagtcccagggcgtggaggtagccctggcgcct
gaggagctggagctggaccccatggccatgacccagaagtacgaggagcacgtgcgggag
cagcaggcgcaggtggagaaggaggacttcagcgacatggtggccgagcacgccgccaag
cagaagcaaaagaaacgcaaggcgcagccccaggacaaccggggaggggccaagaaatac
aaggagttcaagttctag

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