Gadus morhua (Atlantic cod): 115529776
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Entry
115529776 CDS
T10832
Symbol
rin1
Name
(RefSeq) ras and Rab interactor 1 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115529776 (rin1)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115529776 (rin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
115529776
NCBI-ProteinID:
XP_030194691
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All DBs
Position
17:15850279..15878622
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AA seq
822 aa
AA seq
DB search
MWMQEEVRRPHSGPQRAFSVLDRLLLTHPVWLQLSLNRDSALYILLREPVGTFLVRKCGF
SHRKLLCLRATKERSPASIRELFICEEDSTFSLESSALSFPDLCRLVAFYCISRDVLPFP
LQLPEVIARATSHRQLEAISHMGQEFWNASSPTENGSVDQSEEFGPKGQLVPAVAPALDL
LGGPLKQGKLCFINPLFLQLELPQSQQALQTLQALQTQQQQSSHGGASTKRLRFKRSMRV
RLSTDGSMHLSMEGGGSSASSSPSRTPERPGPPEERLPQRKVHAGAGPLRRSPAVSPASL
EDEELPPARAPQAAGEPVPPQQEPSVEAAVLGLDAVPTPSLAELDSSSSFSSLDEEPDQD
ASPPADDASASLEGFLLPPSASTSSSPSLLQAAAPHRPPLMRSGCRGGLQRMSAAFVCFF
APEKRVTRLVEELSRDRRSAFGAMVQDFLQTQREELRRLASPSSSAGAAGGSVEVLQGLR
LFLTQAKSCLLDSGELEPPIQTLVPESEQDLAMERAMFSSVLRPLKKLLDNTLVALHRLD
GSSQRLAQDLLRVKGGGLERLGIRAPSGAAYDREVERVRQKLGMMQRSHSPIDKVLLLLQ
ACKCVHKAMGSLHRQEVSWEDFLPSLTHVIVECNRPHILLEVEYMMELLEPSWLCGEGGY
YLSSVYASLCLIQSLEAKAPRPPGCLTREAQEELREWGRRRGREAQIHRESQRIQRCVRI
LFQDGEQSAVRTLQWQAGDSAPALAQLCADAFGVPDAGRYALYWRSGGEMRPLPPHARPQ
DLAGHSEGGPSLSYLRTDHDFSKMRRLTRGGAVDLSESVCEE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgcaggaggaggtgcgccgtcctcactcaggtcctcagcgggccttcagcgtg
ctggaccggctgctcctcacgcaccccgtctggctgcagctgtcgctcaaccgagactcc
gccctctacatcctgctgagagagccagtcgggacgttcctggtgcgcaagtgcggcttc
agccacaggaagctcctgtgtctccgggcaaccaaggagcgaagccccgcctccatccga
gagctcttcatctgtgaggaagactccactttctccttggagagctctgcactcagcttc
cctgacctctgcagactggtggccttctactgcatcagccgggatgtgttgcctttccca
ctgcagctgcccgaggtcatcgctcgagcgacctcacacaggcagctggaagccatctcc
cacatgggacaagagttctggaacgcatcgagccccaccgagaatggatccgtggaccag
tcggaggagttcggtcccaagggccagcttgtaccagctgttgcgccggcgctggacctg
ttggggggcccactgaaacaggggaagctttgcttcatcaaccccctcttcctgcagctg
gagctcccccagagccagcaggccctccagacccttcaggcccttcagacccagcagcag
cagtccagccacggcggcgcctccaccaagcggctccgcttcaagcgcagcatgcgggtg
cgtctctccaccgacggctccatgcacctctccatggagggcgggggctcctccgcctcc
tcctccccctcccgcaccccggaacgaccggggccccccgaggagaggctcccccagagg
aaggtgcacgccggggccgggcccctgaggaggagccccgcggtgtcccccgcctcgctg
gaggacgaggagctgccgccggcccgggccccgcaggcggccggggagcccgtcccccct
cagcaggagcccagcgtggaggcggcggtgctgggtctggacgccgtgcccaccccctcc
ctggcggagctggacagcagcagctccttcagcagtctggacgaggagcccgaccaggac
gcctccccgcccgctgacgacgcctccgcctccctcgagggcttcctccttcccccctcc
gcctccacctcctcctccccctccctgctccaggcggcggccccccaccgcccgcccctc
atgcgctccggttgccgcggcggcctgcagcgcatgagcgccgcctttgtgtgtttcttc
gccccggagaagcgggtgacccggctggtggaggagctgtcccgggaccgccgctccgcc
ttcggcgcgatggtccaggacttcctgcagacgcagagggaggagctgaggcgcctggcg
tcgccgtcctcctccgcgggggcggcggggggctccgtggaggtgctgcagggcctgagg
ctcttcctgacccaggccaagagctgcctgctggatagcggggagctggagccgcccatc
cagaccctggtgccggagagcgagcaagacctggccatggagcgcgccatgttcagctcc
gtgctgcggcccctgaagaagctcctggacaacaccctggtggccctgcaccgcctggac
ggctcctcgcagcgcctggcccaggacctgctccgcgtcaaggggggcggcctggagcgg
ctggggatccgggccccctcgggggccgcctacgaccgggaggtggagcgggtgaggcag
aagctgggcatgatgcagaggtctcactcgcccatcgacaaggtgctgctgctgctgcag
gcctgcaagtgcgtccacaaggccatggggtccctgcaccgacaggaagtgagctgggag
gacttcctgccgtcgctcacccacgtgattgtggagtgtaacaggccccatatcctcctg
gaggtggagtacatgatggagctgctggagccgtcctggctctgtggagaggggggttac
tacctgagcagcgtgtacgccagcctctgtctgatccagagcctggaggccaaggcgccg
cgtcccccgggctgcctgacacgggaggcccaggaggagctcagggagtggggccgcagg
cggggacgggaggcccagatacaccgggagagccagaggatccagaggtgcgtgcggatc
ctgttccaggacggcgagcagagcgccgtgcgcaccctgcagtggcaggcgggcgactcg
gcgccggccctggcccagctgtgcgccgacgcctttggcgtgccggacgccggccgctac
gccctgtactggcgcagcggcggcgagatgcggccgctgcccccccacgcgcggccccag
gacctggcggggcacagcgagggggggccctcgctgtcctacctgcgcaccgaccacgac
ttcagcaagatgcggcggctgacccgcggcggggcggtggacctcagcgagtcggtgtgc
gaggagtga
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