Gadus morhua (Atlantic cod): 115529860
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Entry
115529860 CDS
T10832
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115529860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115529860
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115529860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H
T5orf172
zf-HC5HC2H_2
zf-RING-like
PHD_NSD
FANCL_C
PHD
Motif
Other DBs
NCBI-GeneID:
115529860
NCBI-ProteinID:
XP_030194844
Ensembl:
ENSGMOG00000007500
LinkDB
All DBs
Position
17:7283963..7288027
Genome browser
AA seq
267 aa
AA seq
DB search
MVVEVESFFGVYMLFCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGKGPWEM
VLIIHGFPSDIAALRFEWAWQHPHSSRRLTHVPRRATKESSLQFHWRVVSSMLRAPPWDR
LPLTARWLKQEYRLDFEPGLQPPLHIPLAFGAVRAKKQQQQPSQSEEEEEVAKDWCFLCK
RPVKAAEQLSCLQPSCPMTSHMICLAKRFLHAEPSHLLPVEGECPSCHHSVLWGSLLRHQ
KGCHGDLEEVTAATSSSHSHWADQLQI
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggtagtagaagtcgagagcttctttggcgtatacatgttattttgcaccaatcctaaa
tttaaaggtcgcatctatattggatttacggtgaaccctgagcgtcgcattggacagcac
aatgctggccgacatcgagggggagccaagaggacgagtgggaaagggccatgggaaatg
gttctgattattcatggttttccttcggacattgctgctctacggtttgagtgggcgtgg
cagcacccgcactcttcgcggcggctgacccacgtgccgcggcgtgccacgaaggagtcg
agcctgcagttccactggcgcgtggtctccagcatgctgcgcgcgcccccctgggaccgc
ctgccgctgaccgcccgctggctcaagcaggagtaccgcctggactttgagcccggcctc
cagccgcccctccacatcccgctggcgttcggcgccgtccgggccaagaagcagcagcag
cagccgtcgcagtccgaggaagaggaagaggtggcaaaggactggtgtttcctgtgcaaa
cgtcccgtcaaggccgcagaacaactgtcctgcctccaaccttcctgtcccatgaccagc
cacatgatttgcctggccaagcgtttcctgcacgcggagccctcccacctcctccccgtg
gagggcgagtgtccatcctgtcaccactctgtgctctggggcagcctgctccgccatcaa
aagggttgccacggagacctggaagaggtcaccgctgccacttcctcatcacatagccac
tgggcagaccaactgcagatatga
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integrated database retrieval system
