KEGG   Gadus morhua (Atlantic cod): 115530629
Entry
115530629         CDS       T10832                                 
Symbol
itgb3
Name
(RefSeq) integrin beta-3
  KO
K06493  integrin beta 3
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03266  Virion - Herpesvirus
gmh04081  Hormone signaling
gmh04145  Phagosome
gmh04148  Efferocytosis
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
gmh04517  IgSF CAM signaling
gmh04518  Integrin signaling
gmh04810  Regulation of actin cytoskeleton
gmh04820  Cytoskeleton in muscle cells
gmh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    115530629 (itgb3)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    115530629 (itgb3)
   04512 ECM-receptor interaction
    115530629 (itgb3)
   04517 IgSF CAM signaling
    115530629 (itgb3)
   04518 Integrin signaling
    115530629 (itgb3)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115530629 (itgb3)
   04148 Efferocytosis
    115530629 (itgb3)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115530629 (itgb3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115530629 (itgb3)
   04810 Regulation of actin cytoskeleton
    115530629 (itgb3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115530629 (itgb3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115530629 (itgb3)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115530629 (itgb3)
   04515 Cell adhesion molecules [BR:gmh04515]
    115530629 (itgb3)
   04090 CD molecules [BR:gmh04090]
    115530629 (itgb3)
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115530629 (itgb3)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115530629 (itgb3)
Cell adhesion molecules [BR:gmh04515]
 Integrins
  Integrin beta subunits
   115530629 (itgb3)
CD molecules [BR:gmh04090]
 Proteins
  115530629 (itgb3)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2 EGF_integrin EGF_TEN EGF_Teneurin
Other DBs
NCBI-GeneID: 115530629
NCBI-ProteinID: XP_030195149
Ensembl: ENSGMOG00000010911
LinkDB
Position
18:18246359..18274549
AA seq 795 aa
MGALITRWTTWANLLIWIGITGVCGSNVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGTA
GSSRCDLKAKLIAAGCAPAGLESPSSTLQVVENRPLTRKAAGATKDVTQIQPQKLHITLR
PDDAKRFRVKVRQVEDYPVDLYYLMDLSFSMNDDLFHLRSLGKQLAVAMNRTTSNLRMGF
GAFVDKPLSPYMYIAPEAAVKNPCVIINTTCLPQFGYKHVLSLTGEVERFTEEVRKQMVS
RNRDSPEGGFDAIIQVAACKDRIGWRTGASHLLIFASDAKAHMALDGRVAGIVRPNDGQC
HLNARNMYSMSTIMDYPSLALINEKMSENNINLVFAVTQSVVSLYQNYSELIPGATVGML
SKDSRNVIQLILNAYAKIRSKVELEVLGVPEELSLSFNATCLNGQLNPGLKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFVIKPVGFKDSLSISVTFECDCRCQAKAQPDSPKCHHGNG
TYECGMCLCHPGRLGPHCECSEGDFSPLQKDHCGATGGAGGAGGSVCSGRGDCVCSQCVC
LPSDFGKVWGKHCECDDFNCLRYKGKLCSGHGTCDCGFCVCDADWQGENCNCSRRTDTCE
SSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFED
NTCTHICRDEIELVDDLVLQDTNAVNCTYKDENDCVVRFQYYEDASGKSILFVVREPDCP
KGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFARFEEERAHAKWDTGHNPLYK
GATSTFTNITYRGNR
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgggcgctctcataacacgatggacaacgtgggcaaaccttttgatttggattggaata
acaggcgtctgtggctccaacgtgtgcacgtccagaggggcaagcacgtgtaagcagtgc
ctggccgtgcatcccagctgtgcctggtgcttccaagaggactttgggcagggcaccgct
ggctcttcgcggtgcgacctgaaggctaagctcatcgctgcgggctgtgctcccgcaggc
ctggagtccccctccagcacactgcaggtggtggagaaccggcccctgacgcgcaaggcg
gcgggggccaccaaggacgtcacgcagatccagcctcagaagctccacatcaccctccga
ccagatgacgccaaacgtttccgggtgaaggttcgccaggtggaggactaccctgtggat
ctctactacctcatggacctctcgttctccatgaacgacgacctgttccacctgcgctca
ctgggcaagcagctggccgtggccatgaaccgcaccaccagcaacctgcgcatgggcttc
ggggccttcgtggacaagccgctctcgccttacatgtacatcgcccccgaggcggccgtc
aagaacccctgtgtcattatcaacaccacctgcctgccccagtttggctacaagcacgtg
ctgtcgctgacgggggaggtggagcgcttcactgaggaggtcaggaagcagatggtgtcc
aggaaccgggactcacccgagggtggcttcgacgccatcatccaggtcgccgcctgcaag
gaccggatcggctggcggaccggagcgtctcacctgctgatctttgcgtccgacgccaag
gcccacatggctctggacggccgcgtggcggggatcgtccgccccaacgacgggcagtgt
cacctcaacgcccggaacatgtacagcatgtccaccatcatggactacccctctctggcg
ctgatcaatgagaagatgtcggagaacaacatcaacctggtatttgctgtcacccagtcg
gtcgtctctctctaccagaactacagtgagctgattcctggcgctaccgtgggcatgctg
tccaaggactcacgcaatgtgatccagctcatactgaacgcgtacgcaaaaatccgctcc
aaggtggagctggaggtgctgggggttcccgaggagctgtccctgtccttcaacgccacc
tgtctgaacggacagctcaacccgggactcaagtcctgctccggactcaagatcggagac
acggtgtccttcagcgtggaggcgcgtgcgcgcggctgccccaagcagaagaagaagacc
ttcgtcatcaagcccgtgggcttcaaggactctctctccatcagcgtcaccttcgagtgc
gactgccgctgccaggccaaggcccagccggacagccccaagtgtcaccacggcaacggc
acctacgagtgcggcatgtgcctgtgccacccggggcggctgggcccgcactgcgagtgc
tcggagggcgacttcagccccctgcagaaggaccactgcggcgcgacggggggcgcgggc
ggggccgggggcagtgtgtgcagcgggcgcggcgactgcgtgtgcagccagtgcgtgtgc
ctgcccagcgacttcggcaaggtgtgggggaagcactgcgagtgcgacgacttcaactgc
ctgcgctacaagggcaagctgtgctcaggtcatggtacgtgtgactgtggtttctgcgtg
tgcgacgccgactggcagggggagaactgcaactgctcgcggcggacggacacctgcgag
tccagcctgggtctgctgtgcagcgggcggggccagtgtgtgtgcggggcctgtgagtgc
acccagcccggggcctacggggccacctgcgacaagtgtcccacctgccccgatgcctgc
accatgaagaaagagtgtgtggagtgtaaacacttcaagagagggaagctgtttgaggac
aacacctgcactcatatctgcagggatgagattgaactagtggacgacttggtgcttcaa
gatacgaacgctgtcaactgtacctacaaggacgagaacgactgtgtggtgcgcttccag
tactacgaggacgccagcgggaagtccatcttgtttgtggtcagagagcccgactgcccc
aagggcccggatatcctagtggtgctgctgtcggtggcgggggccatcctgttcctgggt
ctggccgcgctgctcatctggaagctgctggtcaccatccacgaccggcgggagttcgcc
cgcttcgaggaggagcgagcgcacgccaagtgggacacgggccacaaccccctgtataaa
ggagccacttcaaccttcacaaacatcacgtacagaggcaaccgctga

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