Gadus morhua (Atlantic cod): 115530686
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Entry
115530686 CDS
T10832
Name
(RefSeq) tripartite motif-containing protein 16-like protein isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115530686
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115530686
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115530686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
CC_BshC
Baculo_PEP_C
FapA
Motif
Other DBs
NCBI-GeneID:
115530686
NCBI-ProteinID:
XP_030195237
Ensembl:
ENSGMOG00000010687
LinkDB
All DBs
Position
18:complement(9506785..9514313)
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AA seq
649 aa
AA seq
DB search
MADTAPKVAVLDLKESQLCTACSRATDPDAPPCPVCSDAGGGRGKGGKTEPAPDPKENGT
VIETPVIETPVMKSKGGDSQDSKLIEETKMQEDLLVPENPEKQNEEQSDEKPQTDDKPKE
EDGEEELNQGDMEEELAKEEPIGPEDVVCDSCIDSPRRAMKSCLTCLVSYCEAHLRPHLE
NQKFHNHRLVEPLRDIERRTCEGHKWPLDLFCLADSCCVCTDCFLEEHKGHKSLPVREAR
RQIEGELREKQVEMVKIVTAAENAINKLQVNAVTIENSVKEVREVIESQFAELQAAVERV
KKEVMEVLESEEKQSLKQAEGIRAHLEQRCAELKKTQGQVEKISKNKNDVDFLQEYSEWK
KETLDISLPGVYIGLMDRLHSFSRTIKDSTMEMSQKLTSSYMDKIKETCKNDKMGIKTTV
HEIIASKQNIGIPDPKTRDDFLKYASPVTLDGDTAHKFLRLTEENRKVTNTTPWQHPYPE
LPERFEHWRQVLATESFYLGRKYFEVDASGDGTHVGLTYKSIDRKGPESNSCITGNNFSW
CLQWNGRTYSAWHSDVETPLSLDKFTRIGVYLDYSQGLLAFYGVSDAMSLIHEYRAEFLE
PLYPAFWLPKKENVVVLVPPGEALPLKSPSPQASPANSIVGSKAGDNSD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcagatactgcacccaaagtggcggtcctcgacttaaaagaatctcaactttgcacc
gcctgttctcgggccacggaccccgacgcacccccgtgccccgtgtgcagtgatgccggg
ggggggagaggtaaaggcggcaagacggagccagcacccgacccgaaggagaacgggacg
gtgatcgaaaccccggtgatcgaaaccccagtgatgaagagcaaagggggggacagtcag
gactcgaagttaatcgaggagaccaagatgcaggaagacctgctggtaccggagaacccc
gaaaagcaaaacgaggaacagagtgacgagaagccacagaccgacgataaacctaaagaa
gaagatggggaagaagaattgaaccagggggatatggaggaagaactagccaaagaggag
cccatcggcccggaagatgtggtctgtgactcgtgcatcgacagccctcggcgggccatg
aagtcctgtctcacctgcctggtgtcctactgcgaggcccacctccgaccccacctggag
aaccagaagttccacaaccaccgtctcgtggagcccctgcgggacatcgagagacggacg
tgcgagggccacaagtggcccctggatctgttctgcctggcggacagctgctgcgtgtgc
acggactgcttcctcgaggagcacaagggccacaagtccctgccagtcagagaggcccgc
cgacaaatcgagggcgaactgagggagaagcaggtcgagatggtgaagatcgtcacggcg
gcagagaacgccatcaacaagctccaggtcaacgctgtgaccatcgagaactcagtgaag
gaggttcgggaggtgatagagagccagtttgcggagctgcaggcggcggtggagcgggtg
aagaaggaggtgatggaggtcctggagagcgaggagaagcagtctctgaagcaggctgag
ggcatccgggctcacctggagcagaggtgtgctgagctcaagaagacccagggccaggtg
gagaagatctccaagaacaaaaacgatgtggacttcctacaggagtattcagagtggaag
aaggagacgctggatatttcgctgccaggagtctacatcggtctgatggatcggttacat
tcgtttagccgcaccataaaggactccacgatggaaatgagccagaagctcacgtcttca
tacatggataagatcaaagagacatgcaaaaatgacaagatgggaataaagaccacggtt
catgaaatcatcgcatcaaaacaaaacattggcatccctgatccaaagacgcgagatgac
ttcctcaagtatgccagtcctgtgaccttggacggcgacaccgcccacaagttcctacgc
ctgactgaggagaaccgcaaggtgaccaacacaacgccctggcagcacccgtacccagag
ctgcccgagcgcttcgagcactggcgccaggtgctggccaccgagagcttctacctgggc
cgcaagtacttcgaggtggacgcgagcggggacggcacgcacgtggggctcacctacaag
agcatcgaccgcaagggcccggagagcaacagctgcatcacggggaacaacttttcctgg
tgccttcagtggaatggccgcacctactcggcctggcacagcgacgtggagaccccactg
agcctggacaagttcacgcgcatcggcgtctacctggactacagccaagggctgctggcg
ttttacggcgtgtccgacgccatgagcctcatccacgagtaccgggcggagttcctggag
cctctgtatccggccttctggctgcccaagaaggagaacgtggtggtcttggttccaccc
ggtgaggccttgccactaaagagtccttcccctcaagcctcccccgcaaacagtattgtt
ggatccaaggccggcgacaatagcgattaa
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integrated database retrieval system
