KEGG   Gadus morhua (Atlantic cod): 115530820
Entry
115530820         CDS       T10832                                 
Symbol
rac1
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04010  MAPK signaling pathway
gmh04145  Phagosome
gmh04148  Efferocytosis
gmh04310  Wnt signaling pathway
gmh04370  VEGF signaling pathway
gmh04510  Focal adhesion
gmh04520  Adherens junction
gmh04530  Tight junction
gmh04620  Toll-like receptor signaling pathway
gmh04810  Regulation of actin cytoskeleton
gmh05100  Bacterial invasion of epithelial cells
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115530820 (rac1)
   04310 Wnt signaling pathway
    115530820 (rac1)
   04370 VEGF signaling pathway
    115530820 (rac1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115530820 (rac1)
   04148 Efferocytosis
    115530820 (rac1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115530820 (rac1)
   04520 Adherens junction
    115530820 (rac1)
   04530 Tight junction
    115530820 (rac1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115530820 (rac1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    115530820 (rac1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115530820 (rac1)
   05100 Bacterial invasion of epithelial cells
    115530820 (rac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115530820 (rac1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115530820 (rac1)
   04031 GTP-binding proteins [BR:gmh04031]
    115530820 (rac1)
Membrane trafficking [BR:gmh04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    115530820 (rac1)
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    115530820 (rac1)
  Macropinocytosis
   Ras GTPases
    115530820 (rac1)
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    115530820 (rac1)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115530820 (rac1)
  Exosomal proteins of other body fluids (saliva and urine)
   115530820 (rac1)
  Exosomal proteins of colorectal cancer cells
   115530820 (rac1)
  Exosomal proteins of bladder cancer cells
   115530820 (rac1)
GTP-binding proteins [BR:gmh04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    115530820 (rac1)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 115530820
NCBI-ProteinID: XP_030195472
Ensembl: ENSGMOG00000002652
LinkDB
Position
18:13642235..13646988
AA seq 193 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLNPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRRRRKCMLM
NT seq 582 nt   +upstreamnt  +downstreamnt
atgcaggccatcaagtgtgtggtcgtgggcgacggggctgttggtaaaacatgcctactc
atcagctacactaccaatgccttccctggggagtacatccccacagtcttcgacaactat
tctgcaaatgtgatggtagatgggaaaccggtgaatctgggactgtgggacacagctggg
caagaggactatgatcgactcaggccactgtcctacccacaaacggatgtgttcctgatc
tgtttttctctagtgagtccagcctcctttgaaaatgtcagagccaagtggtacccagag
gttcgacaccactgccccaacacgcccatcatcctggtgggcaccaagctcgacctgagg
gatgacaaggacaccattgagaagctgaaggagaagaagctgaaccccatcacctaccct
cagggcctggccatggccaaggagataggcgcggtgaagtacctggagtgctcagcgctg
acccagcgcggccttaagacggttttcgacgaggccatccgggcagtcctttgcccgccc
cccgtgaagaagaggaggaggaggaagtgcatgctgatgtaa

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