Gadus morhua (Atlantic cod): 115530836
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Entry
115530836 CDS
T10832
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115530836 (rnf40)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115530836 (rnf40)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
115530836 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
115530836
NCBI-ProteinID:
XP_030195495
Ensembl:
ENSGMOG00000016582
LinkDB
All DBs
Position
18:complement(290948..311460)
Genome browser
AA seq
986 aa
AA seq
DB search
MSGTGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIGGVSSTEEMDLKVIQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEEKVGVMRQRIKPAAPP
PPAPSASPPASSAPPPAPMEDGGAPAPPAPTAPPPPDGDAQEEQQKEPPPPPDGGAEAPP
RPTEPPHPAALDGAAGPALSEPAKVLLATLDHSGEEEVALQLQDRMQFSKEAVACLVCVF
DRLHSHINSLCRHVQEAASGDEPRSDVLGMNRALLEENGRRQDLASFLQGRHHKMSLEHN
ELVDKVMGSETKVSEMETTVEDLQWDIEKLRKREQKLNKLLAEGMDQLNSGYNSTGSSGG
LPGGQITLNIQKFESLNAELEQNQEVANSRMAELEKLQLELQEAVRESEKLKMDLRNIPE
EVVKETSEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIEHMESDELSLQK
KLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNLQLKG
DVQRYKRKLRETQMEINKLRCQGGDSGVLVLDEPPGDALDVKKEEEEDQEEEEERRKELE
RQRAREREREVERERERERERERQRSEELKRKDSDTLKMLRAELKKAQESQKEMKLLLDM
YKSAPKEQRDKVQLMAAERKSKAEVDELRVRVRELEERERKESKKLADEDALRKIRVAEE
TIDHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLREKDDANFKLMSERIK
SNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQRLEEKEGVLQSALAALEKELAVRTQA
LELHKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERESGNLKRAQEDLSRL
RRRLEKQKKVEVYTDADEILQEEINQYKAKLRCPCCNTRDKETVLTKCFHVFCYECLKTR
YDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaccgggggagggaagcgaccctcgggaggggatagccccccgggcccaccg
gagaagaagagcaaaaaagaggagaagaccacaacaacgctgatcgagcccatccggatc
ggcggcgtgtcatctacggaggaaatggaccttaaagtaattcagttcaagaacaagaag
ctgtgtgagcgcctggagcagaggcaggccatggaggatgagctgcgagagaaaatcgag
aagctggagaagagacaggccacggacgacacaaccctcctgatcgtgaaccggtactgg
tctcagttggaggaaaaagtcggcgtcatgcgccaacgcatcaaaccggccgctcccccc
ccccctgccccctcagccagtccccctgcctcctcagccccgcccccggcccccatggag
gacggcggggctccggcccccccggcccccactgcacccccacctcccgacggagatgcc
caggaggagcagcagaaggagccgcccccaccccctgatggaggggccgaggccccgccc
cggcccacggagcccccccacccagccgccctcgacggcgcggcggggcctgcgctcagc
gagccggccaaggtgctgctggccacgctggaccacagcggcgaggaggaggtcgccctg
cagctgcaggaccgcatgcagttcagcaaggaggcggtggcctgcctggtgtgcgtgttc
gaccggctgcactcccacatcaacagcctgtgtagacacgtgcaggaagcagcgagcgga
gacgagccccgctcagacgtgttggggatgaaccgcgccctgctggaggagaacggccgc
agacaggacctggcctccttcctgcagggtaggcaccacaagatgtccctggagcacaac
gagctggtggacaaggtgatgggctcggagaccaaggtgtctgagatggagaccacggtg
gaggacctgcagtgggacatcgagaagctccgcaagagagagcagaagctgaacaagctg
ctggcggaggggatggaccagctgaactcggggtacaacagcacgggcagctcaggaggc
cttccaggaggccagatcaccctcaacatccagaagttcgagagcctgaatgcagagctg
gagcagaaccaggaggtggccaacagccgcatggcggagctggagaagctgcagctggag
ctgcaggaggcggtgagagagagcgagaagctgaagatggacctgcgtaacatcccagag
gaggtggtgaaggagacgtcagagtacaagtgtctccagtcccagttctccctgctgtac
aacgagtctctgggggtgaagacccagctggacgaggccagggccctgctgctgaccgcc
aagaacgcccacctccggcagatagagcacatggagagcgacgagctgtccctgcagaag
aagctgaggacggaggtgatccagctggaggacacactagcccaggtcaggaaggagtac
gagatgctgcgcatcgagttcgagcagaacctggccgccaacgagcaagcaggccctatc
aacagggagatgcgccacctgatcagcagcctgcagaaccacaacctgcagctgaagggg
gacgtgcagcgctacaagaggaagctcagggagacgcagatggagatcaacaagctgcgt
tgccagggcggagactccggcgtcctggtcctggacgagcctccaggggacgccctggac
gtgaagaaggaggaggaggaggaccaggaggaggaggaggagaggcggaaggagctggag
cgacagagggcccgggagcgggagcgcgaggtggagcgggagcgtgagagggagcgggag
agagagcggcagcgcagcgaggagctgaagaggaaggactctgacacgctgaagatgctg
agagccgagctcaagaaggcgcaggagtcccagaaggagatgaagctgctgctggacatg
tacaagtcggcccccaaggagcagagggacaaggtccagctcatggccgccgagcgcaag
tccaaggcagaggtggacgagctgagggtgcgcgttcgggagctggaggagcgcgagcgc
aaggagagcaagaagctggctgacgaagacgctctgaggaagatccgcgtggccgaggag
accatcgaccacctgcagaagaagctggccgccaccaagcaggaggaggaggccctgctg
agcgagatggacgtgacggggcaggccttcgaggacatgcaggagcagaacagccgtctg
ctgcagcagctccgcgagaaggacgacgccaacttcaagctgatgagtgagcgcatcaaa
tccaaccagatctacaagctgctgaaggaggagaaggaggagctggcggaccaggtcctc
accttcaagacccaggtggacgcccagctgctggtggtgcagcgcctggaggagaaggag
ggggtgctgcagagcgccctggcagcgctggagaaggagctggccgtccgcacccaggcc
ctggagctccacaagaggaaggcggtggaggcggcccagctggcggaggacctgaaggtg
cagctggagcacacgcaggccaagctgaaggagatccaggtctcggtggcggagaaccgc
acggcccgcgagagggagagcgggaacctgaagagggcccaggaggacctctccaggctg
cggcgccggctggagaagcagaagaaggtggaggtctacaccgacgccgacgagatcctg
caggaggagatcaaccagtacaaggccaagctgcgctgcccgtgctgcaacacgcgggac
aaggagacggtgctcaccaagtgcttccacgtgttctgctacgagtgcctgaagacgcgc
tacgacacgcgccagaggaagtgccccaagtgcaactgcgccttcggagccaacgacttc
caccgcatctacatcacctag
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