Gadus morhua (Atlantic cod): 115530993
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Entry
115530993 CDS
T10832
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115530993 (med1)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
115530993 (med1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med1
DUF3915
Motif
Other DBs
NCBI-GeneID:
115530993
NCBI-ProteinID:
XP_030195775
Ensembl:
ENSGMOG00000031087
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Position
18:complement(16485915..16501631)
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AA seq
1877 aa
AA seq
DB search
MAAAVAAVSIQSASPARELTLSAQQAAIQATGDRIKKEEEGTEAEKQSRVAVLLERLHAK
HSASRPWQETSKVVRQAMEKRGAMHAAGHQLLLTCLETLQRALKVSSLASMTDRLESIAR
QNMLGSHLSPSGTECYITSDMFYVEVQLEPAGQLVDVKVAHHGENPASCPELIQHLREKN
FEEFSKHLKGLVNLYKVPGDNKLKTKMYLALQSLELDLTKMMHMFRLATNANTVETILHG
SVGLLTGRSGGRLVSLQCYVSPYDVFEEGTGTQLNLTDTNVPRSLGVSVYVTVEGTSSIY
KLPIAPLITGSHPVDNKGTPSFSSVTNSNCVDLPVCFFLKLNQPMAFSLSFIQRMGAATG
IPVFDSPPALSPLYQLIVHSQLQRLDEGGPPPKPSHNMHFYSCLPDQQHCYFLNGDAPVQ
DGRSLQGALVSKIPFRHPAQVPAILDIIRHQAAYNTLVGSCVKRTSVKEDAAGLLQFEVC
PLTDSSFSVSFQHPVNESLVCVVMEVIDSKQVACKLFKGMSDALICTDDFITKVVQRCMS
IPVTMRAIRRKAETIQADTPALSLIAKTVEIMVKNNLPPSGSPSYNMAGDGANPMGLPGL
AGGNTPTGAGPPGGPNFAGPISTLFGMNRGPAQAGGECLGQAGASVQQQQQQQQQQQQLQ
QGQQGQGHVDDYNKVTQNPILTSLLQITGSVGSSPSSQNAPTQPHQTPPPTSSPASNTKN
HPMLMNLLKDNPTQDFAALYGSSPLERQNSSSGSPRMDGMGGACPGSGSKGKKKRPRGTE
KGGPMPGTPGGGVGPGGGGLGGMGMKGQGPSSMQQHHHQHQATHEDDFHRELFSMDVDAS
QNPIFDVNLPGDGLDTPHSITPAPSQCGTPPSGPVVPYHAQPHVQSQQQQQQQLQPAMPP
RMVRLSSSDSIGPDITEILSDLPEQTGKGGGGGGPGQHHMGSGGEDGGPLDTPIRDSSSS
GQGSAVFDSADIFNTNSNEIPFTDAADLIADATATADTPTSGDSNFFPDAADFNPDLLTS
GHGFSQRYFDDSSPSADGDLDLVKGFGGSSQQNTPSGTPQNPAPHDQSTPEPSMKDPFDI
GLVFGGGNSGGGKPLLVQAPDLGDAHSAHGGVGGSQSPLMMALPGAGGDFKNADAKVKQQ
QQQQQLQQGLMRPKEEGGGGGGGGGSSGMGMCGGGGMGEGKQVKRSRTPSSEGKSKEKLP
KRKKLDTDGKSPSHSSGGRPYTPPSGGSGSGGSMGGGGGSKSPGSSGGRSQTPPGGATPP
IPKITIQIPKGTLSGGKTSSHGGYTSSSSASSSAVGMGAGSGGGKGHHTHSSSSSGKIKT
KEGAMAQGSSSKPGGGGMGPGQSQSKGSSQGMGVKPGSSPITKHGLTGPGGGGGGIGSSN
KMKPLGGKPPGSLMNPNMKPNISPSHSRSGSSGEKLSSPMKMQQSGVPGTPPSSKAKSPM
GSGGGGSSGGSKSSSGGGMGSQKPMGGGSSSGNMSSSSSSGSSSGSMAFSGGSQSQYGGG
GGGSGGGGGGQGGGGGNSGGGGGGGGGGSGGGGGGGGGSSGGGGNQNNANNPNAKGKSPS
RNKKPSLTAVIDKLKSVGGGGVGEDGCEVGPPTGGPAGAAPGPGPGNVPNSAPPNMGPSK
HPMSSQGGDYKREKSEKEAKAKVSVPGPGGDKKLMDTKSAGGVPGAGLAKIIISKTDGVS
PSIKAKVSLQKAGEGGGGGIGESMRPQISSLKASPLFSGSTPSNSRSPGYTPLNHDSESE
SGSSSVAEKSHQNSPSSDDDQSMRPHAPQDFMGSMPLSSGEKHKKHKKEKKRQKERERER
ERERDRERDREKEKKKSSMSMGPSAHPMKPDSWSRSPISASDSSISMMGPERPPRPSPVY
IRNEDDDLMDSALTGNL
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcggtggcggcggtgtctatccaaagcgctagccccgctagagagctcacc
ctgtcggctcaacaagcagccatccaggctaccggtgacaggattaagaaggaagaagag
ggaacagaagcggagaagcagagtcgtgtggcggttttactagagcgcctccatgccaaa
cacagcgcctctcgtccatggcaggagaccagcaaggtggtccgacaggctatggagaag
cgtggggcgatgcacgcagctggacaccagctcctcctcacctgcctggagaccctccag
agagccctgaaagtgtcttctctggcctctatgacggatcgtctggagtccattgcgcgc
cagaacatgctgggctcccacctctccccgtcgggcacggagtgctacatcacctcggac
atgttctacgtggaggtgcagctggagccggccgggcagctggtggacgtcaaggtggcg
caccacggggagaacccagcgagctgtccagagctgattcagcacctgagggagaagaac
tttgaagagttctccaagcatctcaagggcctggtcaacctctacaaggtccctggagac
aataagctgaaaacgaagatgtacctcgcactccagtcgctggagctcgacctcaccaag
atgatgcacatgttcaggttagccaccaacgctaacacggtggagaccattctccacggc
agtgtgggcctgctgacgggccggagcggcggccgcctggtgtccctccagtgctacgtg
tctccgtacgacgtgtttgaggagggcaccgggacccagctcaacctgaccgacaccaac
gttcccaggagcctgggcgtgagtgtgtacgtcaccgtggagggaacctcgtccatctac
aagctgcccatcgccccactcatcaccggctcccacccagtggacaacaaagggacaccc
tccttctcctcggtcaccaactccaactgcgtggatctccccgtgtgtttcttcctgaag
ttgaaccaaccaatggccttctccctctccttcatccagcgcatgggggctgcaacgggg
atcccagtgttcgacagccccccagccctctcccctctgtaccagctgatcgtccacagc
caattacagcgcttggacgaaggtggaccgccccctaagccctcgcacaacatgcacttc
tactcttgtcttccagaccagcagcactgctacttcctgaacggcgacgcccccgtgcag
gacgggcgctccctgcagggggcgctggtcagcaagatccccttccgccacccggcgcag
gtcccggccatcctggacatcatccgtcaccaggccgcctacaacacgctggtgggcagc
tgcgtcaagcgcacctccgtcaaggaagacgcagcggggctcctgcagtttgaggtgtgc
cccctcactgactccagcttcagcgtctccttccagcacccggtcaatgaatcccttgtg
tgtgtggtgatggaggtgattgactctaaacaggtggcctgcaagctgttcaagggaatg
tcggacgccctgatctgcaccgatgatttcatcaccaaagtggtccagaggtgcatgtcc
atccctgtgaccatgagggccatccgcaggaaggcggagaccatccaggccgacacgccg
gccctgtccctcatcgccaagacggtggagatcatggtgaagaacaacctgccgccctcc
gggagcccctcctacaacatggcgggcgacggggccaaccccatgggcctgcccgggctc
gccgggggcaacacgcccacgggcgccggaccccccgggggccccaactttgcgggcccc
atcagcactctgttcgggatgaatcgcgggccggcccaagctgggggggagtgcctgggg
caagccggggcatccgtccagcagcagcaacaacaacaacaacaacagcagcagttacag
caaggacagcaaggacaaggtcacgtggacgactacaacaaggtcacccagaaccccatc
ctgaccagcctcctgcagatcaccgggagcgtgggctccagccccagctcccagaacgcc
cccacgcagccccaccagacgccgccccccacctcctccccggccagcaacaccaagaac
caccccatgctgatgaacctgttgaaggacaaccccacccaggactttgccgcgctgtac
ggctccagccctctggagcggcagaactcctcgtccggttccccccggatggacggcatg
ggcggagcctgccccgggagcggcagcaaagggaagaagaagcgcccgcgggggacggag
aagggcgggccgatgcccggcactcctggcggcggggtcggccccggcggcggcggcctt
ggcgggatggggatgaagggccaggggccgagctccatgcagcagcaccaccaccagcac
caggccacgcacgaggacgacttccaccgcgagctcttctccatggacgtggacgcctcg
cagaaccccatcttcgacgtcaacctgcccggcgacggcctggacacgccccacagcatc
accccggcgcccagccaatgcgggaccccgccctcgggcccggtggtgccctaccacgcc
cagccccacgtccaatcgcagcagcagcagcagcagcagctgcagcccgccatgcccccc
cgcatggtccgcctgtccagctcggacagcatcggcccggacatcacggagatcctgtcg
gacctgcccgagcagacgggtaagggcggcggcggcggcggcccgggccagcaccacatg
ggcagcgggggggaggacggcgggcccctggacacgcccatccgggactcttcgagctcg
ggccagggcagcgccgtcttcgactcggcggacatcttcaacaccaacagcaacgagatc
cccttcacggacgcggcggacctcatcgcggacgccaccgccacggccgacacgcccacc
agcggcgactccaacttcttccccgacgccgccgacttcaacccggacctgctgacgtcc
ggccacggcttctcccagcggtacttcgacgacagctcgccgagcgccgacggggacctg
gacctggtcaaaggcttcggggggagcagccagcagaacactccgtccgggaccccccag
aaccccgcgccgcacgaccagagcaccccggagccctccatgaaggacccgttcgacatc
ggcttggtcttcgggggggggaacagcggcggggggaagcccctcctggtgcaagcgccc
gatttgggggacgcccactccgcccacgggggcgttggaggcagccagagcccactcatg
atggcgctgccgggagcgggaggcgacttcaagaacgcagacgctaaagtgaaacaacaa
cagcagcagcagcagctgcaacagggactcatgagacccaaggaggagggcggaggagga
ggaggaggaggcggctcctctgggatgggcatgtgtggcggcggcggcatgggggaaggg
aaacaggtcaagcgcagtaggacaccgtccagcgagggcaagtccaaagaaaagctgccc
aaacgcaagaagctggacaccgacgggaagtccccatcccacagctccgggggccggccg
tacacgccccccagcggggggtccggctccggggggagcatgggcggtggcggcggctcc
aagtcccccggtagctcgggggggcgctcgcagaccccccccgggggcgccaccccgccg
atccccaagatcaccattcagatccccaaagggacgctctccggggggaagacctcgtcc
cacggggggtacacctccagtagctccgcctccagcagcgctgtggggatgggggcgggc
agcggcggcggcaaaggccatcacacccactcgtcctcttcctccggcaagatcaagacc
aaggagggagccatggcccagggcagcagctccaagcccggcgggggggggatggggccg
gggcagtcccagtccaaagggtcctctcagggtatgggggtcaagccggggtcttccccc
atcaccaagcacgggctgacgggaccggggggcggcgggggagggatcggcagcagtaac
aagatgaaacctctagggggcaagccccccgggtcgctgatgaaccccaacatgaagccc
aacatctccccctcgcactcccgctccggcagctccggggagaagctgtcctctcccatg
aagatgcagcagtccggggtccccgggaccccgccctcctccaaggccaagtcgccgatg
ggctccggggggggcggcagctcgggggggtccaaatcatcctccgggggcgggatgggg
tcccagaagccgatgggagggggctcgtcctccggcaacatgtcctcctcctcctcgtcc
ggctcctcctccggctccatggccttctccggcgggtcgcagtcccagtacgggggagga
gggggtggatcagggggaggagggggagggcaagggggaggtggggggaatagcggcgga
ggaggtggtggaggaggaggagggagtgggggaggtggtggcggtgggggaggcagcagc
ggtggagggggaaaccagaacaatgcaaacaacccaaacgccaaagggaagtcccccagc
cgcaacaagaagccgtccctaacggcggtcatcgacaagctgaagagcgtggggggcggc
ggggtcggggaggacggctgcgaggtggggcccccgacaggcggccccgcgggagcggca
ccgggaccgggtccggggaacgtgcccaacagtgcacccccgaacatgggcccttcgaag
caccccatgtcctcccaagggggcgactacaagcgggagaagtccgagaaggaggcaaaa
gccaaggtttcggttccgggccccggtggggataaaaagctgatggacaccaagtcggcc
gggggtgtccccggagctggcctggccaagatcatcatcagcaagacggacggcgtctct
ccaagcatcaaggccaaggtgagcctccagaaggccggcgagggcggcggcggcggcatc
ggcgagtccatgcgcccgcagatctccagcctcaaggcctcgcccctcttcagcggctcc
accccgagcaacagccgctcgccgggatacacgccgctcaaccacgacagcgagagcgag
tcgggcagcagctcggtggcggagaagtcccaccagaacagccccagctcggacgacgac
cagagcatgcggccgcacgccccgcaggacttcatgggctccatgccgctgagctccggc
gagaagcacaagaagcacaagaaggagaagaagaggcagaaggagagggagcgcgagcgg
gagcgcgagagggaccgcgagagggaccgcgagaaggagaagaagaagtcctccatgtcg
atggggccctccgcgcaccccatgaagcccgacagctggtcccgctcgcccatctcggcc
tcggactcgtccatctccatgatgggccccgagaggccccccaggcccagtcccgtgtac
atacgaaacgaggacgacgacctcatggactctgccctcaccggcaacctttaa
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