Gadus morhua (Atlantic cod): 115531276
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Entry
115531276 CDS
T10832
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04145
Phagosome
gmh04514
Cell adhesion molecules
gmh04810
Regulation of actin cytoskeleton
Brite
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115531276
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115531276
Cell adhesion molecules [BR:
gmh04515
]
Integrins
Integrin alpha subunits
115531276
CD molecules [BR:
gmh04090
]
Proteins
115531276
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
115531276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115531276
NCBI-ProteinID:
XP_030196289
LinkDB
All DBs
Position
18:20254587..20296142
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AA seq
1162 aa
AA seq
DB search
MDWMITLVVCFSGLQASQAFNVDSRAWQTLTTNSGDPSGWFGYKVVQTGSGLLVSEPLLQ
TSPTQRGRIYKCTTKNCQPIPLSVPVFAVNMSLGLTLTKDPASENTLACGPTLTRECRTI
NTFNGLCLKINSQNRAELQRPSILKDCPGLSDIAFLIDGSGSVAVRDFNAMKVFVTRLVS
SLRIGDTRFAITEYSGTPITYYHFDNFDLSKSLESKIPSIRQQNEGTKTARAIEHVVTQV
FSPTRGSRRSSKKVLIVITDGASQDHSNLDRAVNGAEAKGIVRFTIGVGEAFDNYRAKAE
LEKIASRPPKTHVFRVSNFDALDKIRDTLEESIFSIEGTQTGGSLIMEMAQEGFSAAFVP
GGGFQMASVGAYDWSGGFRGYSSDGRLTFPQDEQFVEKDSYLGYSMAVAHTRSGPLTIVG
APRYLHRGVVFVYPKSLDISKGQKVDPSPWQVCQQEISVKTKSQIGEYFGAEIVTMAVNP
TRQMFSKVVLIAAPLHMEEDWEGRVYVCQLTASRVDCQFEEPVVLRGQAGERGRFGSSMA
PLPDLNQDRVYDLAVGAPLENQGQGSVYIFHGDTRGTINPRISQRIAGSDIQPGLQFFGL
SISQSSSDLSGDGLPDLAVGSKGKVFLIRSKPIVMVEAQVTFTPAQIPPSPSDCLTPVNI
SAEVCFTMSGPPSVLQTVQAGINFTLSLDAIRKRAYFTPNVRAQAESFTLNQTGRCFTYR
VVIEPCPDDSLNDLYNELTFSFVGVPSTDNLSPSLSQQALTTSYHPLSFKINCENACVDE
LKVGFNFSGSSAVRVGIDDLLNVTTSLTNLGEDSYNSQVVLTYPAGLSFRKFSTLQGRVE
CSSVDSENGMSPGRSSCWVYRPILKTNAKAVFTVSYGIDSNSQLCHKIRITAKANSGNLD
HSQQSVLNQTEEIHVKYSIFLSIASSLSYTNFTFGRKDLHKPVVNPVTVLNFGRAFNVTV
LIKVPVRLGGEHIWQEREDLQVPECRRDGVEPAARPDFLTEVQQSLTVDCSVASCLVFRC
NMFMGRAQSSTFTLNGNLSSGWIAQIGIQSAKFLLISTATLEYDEDTYIFFSTESKHTPP
IRKIVTEVEVYPVANFTKEIVGGTFGGLLLLAIITAALYKAGFFKSQYKQMIEAGTSGEG
GEGGDGGGEGGGEGGGDGGEAP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggactggatgatcactcttgtagtgtgcttctcaggcttgcaggcgtcccaagccttt
aacgtggattcccgagcctggcaaacgttgactacaaattctggcgatccttctggatgg
tttggatacaaggtcgtccagacaggatctggcttactggtgagcgagccactgttgcag
acatccccaacgcaaagaggcagaatctacaaatgcactactaagaattgtcaacccatc
cctctgtcagttccagtgttcgccgtcaatatgtctcttggtttgacattgacgaaggac
ccagcctctgaaaatactttggcatgcggtccaacccttacaagagaatgcaggactatc
aacacattcaacggattatgcttgaagattaactctcaaaatagagctgaattgcaaaga
ccatcaattctaaaggattgtcctggcctttcggacatcgcctttctgatcgacggctct
ggcagcgtagctgttcgggacttcaacgccatgaaggtctttgtcacgcgtttggtcagc
tccttacgcattggagacacacggttcgccatcaccgagtactcaggaactcctataact
tattatcattttgataattttgacctctccaagtctttggaaagtaaaatcccgtcaata
agacaacaaaatgaaggaacgaagacggcacgagccatcgagcatgttgttacacaagtc
ttctcaccaaccagagggtctaggagaagctcaaagaaggttttgatcgtgattaccgat
ggcgcgtcacaggaccactcaaatttagatcgcgcagtcaatggcgcggaggcaaagggc
atcgttcgatttacaatcggggtgggggaagccttcgacaattatcgtgcgaaagcagag
ttggagaagatcgcgtctagaccacccaaaacacacgtgttccgcgtcagcaactttgac
gccctggacaaaatcagggacacactggaggaaagcatcttctctattgaaggaactcag
acaggtggctctttgataatggagatggcccaggaagggttcagcgcagccttcgtcccg
gggggtgggtttcagatggcatctgtcggagcgtatgattggagtgggggctttcggggc
tactcatctgatggtcggcttacatttccacaggacgaacagtttgtggagaaagacagc
tatctaggctactccatggctgttgctcataccagaagtggacctctaaccattgtaggg
gcgccgagataccttcacagaggagtagtgtttgtctatcctaaatctttggacatctct
aaaggccagaaggttgacccctctccatggcaggtctgtcagcaggaaatctctgtcaaa
acaaagtctcagattggtgagtattttggggcggagatagtgaccatggcagtgaatccc
acccgtcagatgttcagcaaagttgtcctcatcgccgcccctctgcacatggaggaggac
tgggagggccgggtgtacgtctgccaactcaccgcctccagagtggactgccagtttgag
gagccggtcgtcctgcgaggacaagcgggggagagaggaaggttcggatcctccatggct
cccctccctgacctcaaccaggaccgggtctatgacctggccgtcggggccccgctggag
aaccagggccaaggcagcgtgtacatcttccacggcgacacgagaggcaccataaacccc
aggatctcgcagaggattgcaggctcagacatccagccgggattgcagttcttcggcctg
tccatcagccaatcctcctctgacctcagtggggacggactccctgatttagccgtgggg
tcaaagggcaaagtgttcctaatcaggtcaaaacccattgtgatggtggaagctcaagtg
accttcactccggcccagataccacccagcccctctgactgcctcaccccggtgaacatc
tccgctgaagtctgcttcacaatgagcggcccaccttcggtcctacagacagtacaagcc
gggataaattttactctgtcactggacgccatccgaaagcgagcctacttcactccgaat
gtgcgcgcgcaggccgagtctttcactctcaaccagacaggaagatgtttcacctaccga
gtggtcattgagccctgtcccgatgactctctgaacgacttgtacaatgagctgaccttc
tcgttcgtcggcgtcccctcaacggacaacctcagccccagtctgtcccagcaagccctc
accaccagctaccatccactgagcttcaagatcaactgcgaaaatgcctgtgtggatgaa
ctcaaagtcggtttcaacttcagtggctcctctgccgttcgggtcggcatcgatgactta
ctgaacgtgacgacatccctcaccaacttgggagaagactcgtacaacagccaggtggtt
ctgacctaccccgcaggactttccttcaggaagttcagcaccctgcaggggcgggtggag
tgcagctcggtggacagtgagaacggcatgtctcccggacggagcagctgctgggtctac
agacccatcctcaagaccaacgctaaggctgtgttcaccgtgtcctacggcatcgactcc
aacagtcagctttgccacaagattcgcatcacagccaaggccaacagtggaaacctggat
cactcacagcagagtgtactgaaccagacggaggagatccacgtgaagtacagcatattc
ctttccatcgccagctcactcagttacaccaacttcaccttcggaagaaaggatttacac
aaaccagtggtgaatccagtaacggtgttaaactttgggagggcttttaatgtgacggtg
ctgatcaaggttcctgtgcggctcggaggcgaacacatctggcaggagagggaagacctc
caggttccagagtgccggcgagacggcgtggagccggcggcccgtccagactttctgacg
gaggttcagcagagcctcacagtggactgctcggtggcgagctgtctggtgttcaggtgc
aacatgttcatgggtcgggcgcagagcagcaccttcacactcaacggcaacctcagctct
gggtggatcgcacagatcggtattcagtcggctaagttcctcctcataagcacagccacc
ctggaatacgatgaggacacatacattttcttttccacagagtctaaacacacccctccc
atccgaaagatcgtcactgaggtggaggtgtacccggtagcaaacttcactaaagagatc
gttggaggcaccttcggaggactgctcctgctggccatcattacggccgctctatataag
gctggcttcttcaagagtcaatacaaacagatgattgaagctggcacttctggtgaaggt
ggtgaaggtggagatggtggcggagaaggtggcggagaaggtggcggagatggtggagaa
gcaccgtga
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integrated database retrieval system
