Gadus morhua (Atlantic cod): 115531350
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Entry
115531350 CDS
T10832
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115531350 (vps35l)
Membrane trafficking [BR:
gmh04131
]
Protein recycling
Others
Retriever complex
115531350 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115531350
NCBI-ProteinID:
XP_030196423
Ensembl:
ENSGMOG00000005688
LinkDB
All DBs
Position
18:11236408..11249668
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AA seq
974 aa
AA seq
DB search
MSYDCRNMAAVQWHSRERRYQAELQSSRLECVPVEFGDYHPLKAITVTDAKSRRGARKGS
TSSSSSSSSSVALDPLSSMLDGTDPLSMFAAASAVEVPSLPHSSSAGDLGRKKREEEVVG
TDFEPWSAKRGEILARFTTTEKLSINLFMGTDKAKAPSPGSSAVSEKVRTRLEELDDQEE
GSQRELLNLSQQEYANRIEELNQSLKEAWATDQKVKALKIVIQCSKLLSDTSVIQFYPSK
FVLITDILDTFGRLVYDRISSMCSADSQTLPDSFTAADVNDTAKETCLNWFFKIASIREL
IPRLYVEAAILKCNRFLNKTGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPQL
KDSLNRNFFDLLSTFRQIHGDSVQNQLVLQHVEIPQYLTLYSPAIHWILQCVAYRAPDPL
LTEMMERCKKLGNNALLLNSVMWAFRAEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGR
SLACADPPEAERLTILNEAWKVITKIRGPQDYIHCAEIWVEFTCRHFTKREVNTVLADII
KHLTPDRAFEDAYPLLQSVIQKILTYFHDFSVLFSMERFLPFLDMFQKDGVRVAVCRTIM
EVFIKHQLEPTRDPVILNALLHVCKAMHDSVNAMTLEDEKRSLSLLISGFIRMVWFGRDF
EQQLSFCVEARATFCNLEPLLVQLIHTVNQLAMETRRMMRGNHSRKTAAFVRACAAYSFI
TIPSLSSIFCRLSLYLLSGQVALANQCLSQADAFFKAAVSLLPEVPRTISVEGKSRSSES
LLLDFINNFFAMLLVVPDHPEHGVLYLVRGVLNMVQDYTWEDNGDAKVKVYISALPLLAA
MSQETYLYSIPKVDSNETLYGGDPKFLTEIDKLCETLISQVLDYLKTLGREENTVRRQGS
LSFSLFSSLLAHGDLRNNKLNQLAVNLWNLNHKHGCSDTRTSVRTLEYIKQQAQQPGMAH
IGDMVQRLTLQSRT
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgactgcagaaacatggctgcggtgcagtggcattctcgggagcgccgctac
caggcggagctccagtcctctcgtctggaatgcgtgccggtcgagtttggagactaccat
cctctaaaggcaatcactgtgacggatgccaaatcacgccggggggctcgtaaaggcagc
acgtcctcgtcttcctcctcctcttcctcagtggccctggaccctctgagctccatgttg
gacgggaccgaccccctgtccatgttcgctgctgcctccgccgttgaggtcccaagcctc
ccacacagcagctcagcaggggatttggggaggaagaaaagagaggaggaggtggtggga
actgactttgaaccctggtcagctaaacgaggagaaatcctggccaggttcactacaaca
gagaagctctccatcaatcttttcatgggaacggataaagctaaggcgcccagccctggc
tcctcagccgtctcagaaaaggtccggacccggctggaggagctagacgaccaggaggag
ggttcccagagggagctgctgaacctgtcccagcaggagtacgccaacagaattgaagag
ctaaaccagtccctgaaggaggcctgggccacagaccagaaggtcaaagccctcaagatc
gtcatccagtgctccaaactcctgtccgacacgtccgtgatccagttctaccccagcaag
tttgttctgatcacagacatcctcgacacctttggtcgtctagtgtacgacagaatctcc
agcatgtgctctgcggactcacaaaccttaccagactcgttcactgcggctgatgtcaac
gacaccgcgaaggagacctgccttaactggttcttcaagatcgcctctatcagagagctc
atccccagattatacgttgaggccgccatcttgaagtgcaaccgcttcttgaataaaacc
ggcatacaggagaccctgccccggctgaccgccatgatcagggggataggagaccccctg
gtggctgtctatgccagagcctacctctgcagggtgggcatggaggtggccccccagctg
aaggacagcctgaaccgcaacttcttcgacctgctcagcaccttccggcagatccacggc
gacagcgtgcagaatcagctggtgctacagcacgtggagatcccacagtacctcaccctg
tactcgcccgccatccactggatcctacagtgtgtggcctaccgggcccccgaccctctt
ctgaccgagatgatggagagatgcaagaagctgggtaacaatgccctgctgttgaattcc
gtcatgtgggcgttcagggccgagttcgtggccgccagggcgacagacttcatcggcatg
atcaaagactgcgatgaggccggctttccaaagcatctgttgttcggctcgctgggccgc
agcctggcctgtgcggatcctccggaggcagagaggctgaccatcctcaacgaggcctgg
aaggtcatcaccaagatacgcggtccgcaggactacatccactgtgcggagatctgggtg
gagttcacctgtcgccatttcacaaaacgggaggtcaacaccgttctggccgacatcatc
aagcacctgacccccgaccgggcattcgaggacgcttaccctctgctgcagtctgtgatc
cagaagattctcacctacttccacgacttttccgtcctattctccatggagcgcttcctg
ccgtttttggacatgttccagaaggacggcgtgagggtggcagtgtgcagaaccatcatg
gaggtcttcatcaaacatcagctggagcccaccagggaccctgtgatcctcaacgcactg
ctgcacgtctgcaaggccatgcacgactccgtcaatgccatgaccctggaggatgagaaa
agatctttgtctttgttgatcagcggcttcattcgcatggtttggtttggccgtgacttt
gagcagcagctgagcttctgtgtggaggccagagccaccttctgtaacctggagccgctg
ctggtgcagctcatccacacggtgaatcagctggccatggagaccaggcggatgatgagg
ggtaatcactcccgcaaaacagccgcctttgtcagggcgtgtgctgcctacagcttcatc
accattccatctctgagcagcatcttctgccgcctcagcctctacctgctctctggacag
gtggcgttggccaaccagtgtctatcccaggcggacgccttcttcaaggcggcggtcagc
ctgctgccggaggttcctcgcaccatcagcgtggagggcaagagccgctcctctgagagc
ctcctgctcgacttcatcaacaacttcttcgccatgctgctggttgtcccggaccacccc
gagcatggcgtgctctacctggtgcgaggggtcctcaacatggtgcaggactacacctgg
gaggacaacggggacgccaaggtcaaggtttacatcagcgcactacccctgctggccgcc
atgagtcaggagacgtacctctactccatacccaaagtggactcgaatgaaactctttac
gggggcgaccctaagttcctcacggagatcgacaagctgtgtgagaccctgataagccag
gtgttggactacctgaagaccctgggtcgagaggagaatacggtgcgtcggcagggctcg
ctgtccttctctctgttcagctcgctactagcccacggggacctgcgcaacaacaagctc
aaccagctggccgtcaacctctggaacctcaaccacaagcacggctgcagcgacacgcgc
acctccgtgcgcacgctggagtacatcaagcagcaggcccagcagcccggcatggcccac
atcggtgacatggtgcagagactcacgctgcagtccaggacctga
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