Gadus morhua (Atlantic cod): 115531357
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Entry
115531357 CDS
T10832
Symbol
rnps1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
gmh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115531357 (rnps1)
03015 mRNA surveillance pathway
115531357 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115531357 (rnps1)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115531357 (rnps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_ACIN1
RRM_3
RRM_occluded
RRM_MUD2_C
RBD_AKAP-17A
Nup35_RRM_2
RRM_10
Motif
Other DBs
NCBI-GeneID:
115531357
NCBI-ProteinID:
XP_030196432
LinkDB
All DBs
Position
18:complement(5034227..5039591)
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AA seq
278 aa
AA seq
DB search
MAPSPTKRKEDDKTKEHQRSGKEKSGATKDGAEKDRGRDKNRKHRSASTGSSSSSSSSGS
SSGSSSGSSSSGSSRSGSSSSRSSSSSSSSPSPSRRRHDNRRRSRSKSKSVKKDDRDRDR
ERRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMVEMPMNRLYPHLSKGYAYVE
FESSDEAEKALKHMNGGQIDGQEITATAVLTQRVRPPPRRMTPPRRMPPPPPMWRRSPPR
MRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcacccaccaagaggaaggaagacgacaaaaccaaggagcaccaacgcagc
ggaaaggagaagtccggggccaccaaggacggggcggagaaggaccgcggccgcgacaag
aaccgcaagcatcgcagcgcttccaccgggagcagcagctccagctccagttctggctcc
agttctggctcttcaagcggctccagctcctcgggctccagccgctccggctcttccagc
tcccgctcctcttcctcttcttcctcctctcctagccccagccgccgtcgtcatgacaac
agacgccgctcccgctccaaatccaagtctgtgaagaaggacgacagagaccgcgaccgc
gagaggcgccgccgcagccccacccccaagcccaccaaggtgtacctgggacgcctcacc
aggaacgtcataaaggagcacatccaggagatcttctccacctacggcaagatcaagatg
gtggagatgcccatgaaccgcctgtacccccacctgtccaaaggctacgcctacgttgag
tttgagagctctgacgaggcggagaaggccctgaagcacatgaacggaggtcagatcgat
ggacaggagattacggccactgccgtgctgactcagagggtgcgcccgcccccccgccgc
atgaccccgccccgcaggatgcccccgcccccccccatgtggcggcgcagccccccccgc
atgaggagaaggtcccggtctccacggagacgctcccccgtgcgtcgcaggtcccgctcc
cgctctccagggcgccggcgtcaccgctcccggtccagctccaactcctcccgctag
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