Gadus morhua (Atlantic cod): 115531440
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Entry
115531440 CDS
T10832
Symbol
vps25
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein-sorting-associated protein 25
KO
K12189
ESCRT-II complex subunit VPS25
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115531440 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115531440 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115531440 (vps25)
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
115531440 (vps25)
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115531440 (vps25)
Exosomal proteins of colorectal cancer cells
115531440 (vps25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
Motif
Other DBs
NCBI-GeneID:
115531440
NCBI-ProteinID:
XP_030196565
Ensembl:
ENSGMOG00000019296
LinkDB
All DBs
Position
18:complement(2947417..2952200)
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AA seq
174 aa
AA seq
DB search
MSFEWPWQYNFPPFFTLQPNVDTRQKQLAAWCSLALAYCRHHKLYTLDVMESQESPVFNN
KKIERKLSTEAIQVVFEELRKKGNLDWLDKNKSRCLVMWRRPEEWGKLIYQWVSKVGMIN
SVFTLYELSNGDDTEGEEFHGLEEWILLRSLRPLQTDGKAELITMDDSKGVKFF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgagtggccctggcagtataacttccctccgttttttacattacagcctaat
gttgacaccagacagaagcagctggcggcatggtgctcgctggcgctggcttactgccga
caccacaaactctacaccctggacgtcatggaatctcaggagagccccgtgttcaataac
aagaagatagaacgaaaactttcaacggaagcgatccaagttgtctttgaggaactcaga
aaaaaaggcaacctggactggctggacaaaaacaagtctcggtgtttagtgatgtggaga
cggccggaggagtgggggaagctgatctaccaatgggtctccaaagtcggcatgatcaac
tctgtgtttacactttacgagctgtccaacggggacgacaccgagggcgaagaattccac
ggtcttgaggagtggatactgctgcgttccttgcggccccttcagacggacggcaaggcg
gagctcatcaccatggacgacagcaagggtgtcaagttcttctga
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integrated database retrieval system
