KEGG   Gadus morhua (Atlantic cod): 115531452
Entry
115531452         CDS       T10832                                 
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03420  Nucleotide excision repair
gmh03460  Fanconi anemia pathway
Brite
DNA replication proteins [BR:gmh03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    115531452 (ercc4)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115531452 (ercc4)
SSDB
Other DBs
NCBI-GeneID: 115531452
NCBI-ProteinID: XP_030196589
Ensembl: ENSGMOG00000000603
LinkDB
Position
18:12801323..12807893
AA seq 916 aa
MAGPLLEFETEMFLSLFGSDGLLVTAEGMGIDRILLQFMRVYSEEGSLVLLLNTTPPEQE
YFTEQLRVEGVTHLPKTVNSDIQSAERYDVYTQGGVLFVTSRILVVDFLTDRIPADLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
FLWPRFQASVNGALDRHKPEVVELHVELTPAMRAIQTSVMDIMSACLKELKRFNPSLEAE
DLSLENTLGSAFDKTIRHYLDPLWHQLGGKTKNLVQDLKVLRTLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFVNARSRVYRYPQNKKKMKMGLEADAKQPTVATEG
RRELVLEKSPKWEALTEVLEEIEKENQSAAHEPGRVLICASDDRTCAQLHQYISRGSDAL
LHRLYERTVAKRDAGAGAALQLESHREGRGWAKNKPQDDATAAAASRGKKKTAAAKPKNG
KQTSKTKSRPSLTLTQMAGAKSGDGAEWMGSSGDEDDGGGGGGDGLSDEEEAPLKLDLSS
DCYYGVVREPLTVIHPLRGCTDPYSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKANRPG
KTLRVYFLIYGGSTEEQKYLTALSKEKKAFEHLIREKATMVVPEEREGREDTNLDLARSL
EPANATTNTRKAGGQDQPREPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTA
DTCVERKSVSDLIGSLQSGRLYTQCVSMTRYYKRAVLLIEFDPAKPFSLVARSEFRHELS
ANDVTSKLTLLTLHFPRLRILWCPSPHATAELFEEMKRGRGEPDAAAAQAIAAESDAKTA
ELYNPAPYDFLLKMPGVNAKNVRALVSKADSLAELAEFSQERLAQVLGHTGNAKMLYEFL
HNVADVPAPAAKGRRT
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggcgggaccgctgctggagtttgagaccgagatgttcttgagtctgttcggctctgat
gggctcttggtgacagcagagggtatgggcatagaccgcatcctcctgcagttcatgagg
gtctactccgaagaagggagtctggttctgttgctcaacacgacccctcctgaacaggag
tattttactgaacagttacgagtggaaggtgtcacccacctgcccaagaccgtgaacagc
gacatccaaagcgcagagcgctacgacgtgtacacccagggaggagtgctgttcgtcact
agcagaatcctggtggtcgatttcctaactgaccgcatccctgctgatctcatatcaggt
atcttggtgtatcgtgcccacaagatcatcgagtcatgccaggaggccttcatcctgcgt
ctgttcaggcagaagaacaagacgggcttcatcaaggccttcacggacaaggccaccgcc
ttctcctcaggattctgccaggtggagcgcgtcatgaggaacctcttcgtcaagaagctc
ttcctttggcccaggttccaggcgtcggtgaacggggcgttggaccgacacaagcccgag
gtggtggagctccacgtggagctgaccccggccatgcgcgccatccagacctccgtcatg
gacatcatgagcgcctgcctgaaggagctgaagcgcttcaaccccagcctggaggcggag
gacctgtccctggagaacaccctgggcagcgccttcgataagaccatccgccactacctg
gaccccctgtggcaccagctggggggcaagaccaagaacctggtgcaggacctgaaggtg
ctgcggacgctgctgctctacctcacccagtacgactgcgtcaccttcctcaacctgctg
gagtccctgcgctccagccagaagaacttcggcagcaactcgggctggctgttcctggac
tccagcacctccatgtttgtgaacgccaggagcagagtttaccgttacccccaaaataag
aagaaaatgaagatgggcctggaggcagacgccaagcaaccaaccgtggctactgagggg
agacgggagctggtgcttgagaagtctcccaagtgggaggctctgaccgaggtcctggaa
gagatcgagaaggagaaccagagcgctgcacatgaaccaggccgtgtgctgatctgcgcc
agcgacgaccggacgtgcgcccagctccaccagtacatcagccgcggctcggacgcgctg
ctccaccggctgtacgagcgcaccgtcgccaagcgggacgccggcgccggcgccgccctc
cagctggagtcccaccgcgagggccgcggctgggccaagaacaagccccaggacgacgcc
accgccgccgccgcctccagggggaagaagaagacggccgccgccaagcccaagaacggc
aagcagacgtccaagacgaagagcagaccctccctgacgctgacccagatggcgggggcg
aagagtggggacggagcggaatggatgggcagcagcggagacgaagacgacggcggcggc
ggcggcggcgacgggctatcggatgaagaggaagcgccgctgaagctggacctgtcgtcg
gactgctactacggcgtggtgcgggagcccctcacggtcatccacccgctgcggggctgc
actgacccctacagcctgacgcgggtactgcacgaggtggagcccagcttcgtggtgctg
tacgacgcggagctcagcttcgtgcgccagctggagatctacaaggccaaccgccccggg
aagacgctgcgagtgtatttcctgatctatggaggatccacagaggaacagaaatatctc
accgcgctctccaaggagaagaaagccttcgaacacctcatcagggagaaggcgaccatg
gttgtgccggaggagcgagagggtcgagaagacaccaatctggacctggcgagaagtctg
gagcccgccaacgctaccaccaacacccgcaaagcaggaggccaggaccagcccagggag
ccctcccgggtcatcgtggacatgcgggagttccgcagcgagctgccctctctgctgcac
cgccgcgggctggacatcgagccggtcaccctggaggtgggcgactacatcctgacggcc
gacacctgcgtggagcgcaagagcgtgagcgacctgatcggctcgctgcagagcggccgc
ctctacacgcagtgcgtgtccatgacgcgctactacaagcgggccgtgctgctcatcgag
ttcgacccggccaagcccttctcgctggtggcgcgctccgaattccgccacgagctgtcg
gccaatgacgtcacgtccaagctgacgctgctcaccctgcacttcccgcgcctgcgcatc
ctctggtgcccttccccccacgccacggccgagctcttcgaggagatgaagcggggccgc
ggcgagccggacgccgcggccgcgcaggccatcgcggccgagtcggacgccaagacggcg
gagctgtacaacccggcgccgtacgacttcctgctgaagatgccgggggtcaacgccaag
aacgtgcgggcgctggtgagcaaggcggacagcctggccgagctggcggagttcagccag
gagaggctggcgcaggtcttggggcacaccggcaacgctaagatgctctacgagttcctg
cacaacgtagccgacgtgcccgcgccagctgcgaaggggagacggacgtga

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