Gadus morhua (Atlantic cod): 115531458
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Entry
115531458 CDS
T10832
Symbol
pax2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115531458 (pax2)
04131 Membrane trafficking [BR:
gmh04131
]
115531458 (pax2)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115531458 (pax2)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115531458 (pax2)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115531458 (pax2)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115531458 (pax2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115531458
NCBI-ProteinID:
XP_030196606
Ensembl:
ENSGMOG00000000463
LinkDB
All DBs
Position
18:complement(10474954..10505833)
Genome browser
AA seq
507 aa
AA seq
DB search
MDIHCKGDPFSAMHLSHVGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDR
LLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIVPSTVSPPVTTASN
DPVGSYSINGILGIPRSNGEKRKRDEGEREFYGSDGSGPNSDSQGSVESLRKHLRADAFT
QQQLEALDRVFERPSYPDVFSTPEHIKPEQANEYSLPALNTGGMDEVKPSLSSSANPDLG
PSVSQNYPVEAFIPPTPSSSCITQEPYEASMAPFTPISSSSSFSSYTTSTSSSSSSYPSS
LACLGLADHQHGHPAALSLEAPAHSFPGPRAPRNTQYAHQAILAGRDMANTTLPGYPPHV
PPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTSYNEAWRFSNPALLMPHREAPPLPLLP
LPMTVTSYHGNQINLQDHGLGLRIAPV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaaggagaccccttctctgcgatgcacttgtcccacgtagggcac
gggggggtgaaccagctgggcggggtgtttgtgaacggaagacccctgccagacgtggtg
aggcagaggatcgtggagctggcccaccaaggtgtgcgtccctgcgacatctccagacag
ctgcgggtcagccacggttgtgtcagcaagatactgggcagatattacgagactggcagc
ataaaaccaggagtgatcggggggtcgaagcccaaagtggccacgccaaaggttgtggat
aaaatagccgactacaaaagacagaaccccaccatgtttgcgtgggagataagagacaga
ctcttagcagagggcatctgtgacaacgacaccgtcccgagcgtgtcgtccataaacagg
attatcagaacaaaagtccagcagcccttccatccgtctcctgatggaacatcgctctca
acgccgggccacaccatcgtaccaagcacagtgtctccaccggtaactaccgcctccaac
gacccggtcggctcgtactccatcaacggcattctgggaattccacgatcaaacggcgag
aagaggaaaagagacgaaggtgagagagaattctatggttcagatggttcaggcccaaac
agtgattctcagggtagtgtggagagtttacggaaacacctcagggccgatgccttcacg
cagcagcagctggaagcgttggaccgggtgtttgagcggccgtcgtacccggatgtcttc
tccacgccggaacatatcaaacccgaacaggctaatgagtactcgctgcctgccctgaat
accggcggcatggacgaagtcaagcccagtttatcctccagcgccaacccagacctgggc
cccagcgtgtcgcaaaactaccccgtagaggccttcatccctccgacaccctcctcatcg
tgtattacacaggagccatacgaggcttccatggctcccttcacccccatctcctcctcc
tcctccttctcctcctacaccacctccacctcctcctcctcctcctcctacccgtcctcc
ctggcttgcctgggcctcgccgaccaccagcacggccaccctgccgccctctcactggag
gccccggcccattcattcccgggcccccgagccccccgcaacacccagtatgctcaccaa
gctatactagcaggtcgggacatggccaacaccaccttacccgggtaccccccccacgtc
ccacctacaggccagggcagctatccaacctccaccctcgctggaatggttcctgggagc
gagttttcgggaaacccctactctcatccacagtacacaagttacaacgaggcatggcga
ttcagcaacccagcactactaatgccgcatcgagaggctccgcccctcccactgctgcca
ctgcctatgaccgtcactagttaccatggaaaccaaatcaatcttcaggaccatgggctc
ggcctccgtattgccccggtgtga
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