Gadus morhua (Atlantic cod): 115531545
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Entry
115531545 CDS
T10832
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115531545
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115531545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115531545
Spliceosome [BR:
gmh03041
]
Common components
Common spliceosomal components
SR proteins
115531545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_3
RRM_PARP14_3
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115531545
NCBI-ProteinID:
XP_030196752
Ensembl:
ENSGMOG00000001599
LinkDB
All DBs
Position
18:15943417..15946479
Genome browser
AA seq
216 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDNRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGGGGAPRRHGGSGRRSR
SRSGSPRRRRRSRSRSRSRSRSRSRYSRSRSRSYSRSRSKSRSQRRSKSKSASRQRSRSK
SKSKSRSRTPPSNVGSKSRSRSKSRPKSPEDNGTES
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggccaccgcccgacgtggagggaatgacctccctcaaagtagacaat
ctgacgtatcggacgtcacccgagactttgcgccgtgtgtttgaaaagtacggtcgggta
ggcgatgtttatatcccccgtgacaggtacaccaaggaaagccgtggctttgccttcgtg
cgtttccacgacaacagggacgccgaagacgcgatggatgcaatggacggtgccctgctc
gacggacgcgagctccgggtgcagatggcgcgctatggccgcccacctgattcccactac
ggccgaagagggggcggcggtgcgccccgtagacatgggggttccggtagaagaagcagg
agccgctcgggtagtccgagacgccgcagacgcagccgttcccggagcagaagccgctcc
cgaagccgctctcgctacagccgttccaggtccaggtcttactccagatcaaggtccaag
tccaggagccagaggagaagcaagtcaaagtctgcttccagacagcgttcccgctcaaag
tccaagtccaagtccaggagtcgaaccccgccatccaacgtgggttcgaagtcccggtcc
aggtccaagagcaggcccaaatctccagaggataatggcacagagtcttaa
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