Gadus morhua (Atlantic cod): 115531593
Help
Entry
115531593 CDS
T10832
Symbol
epas1
Name
(RefSeq) endothelial PAS domain-containing protein 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
gmh04140
Autophagy - animal
gmh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115531593 (epas1)
04137 Mitophagy - animal
115531593 (epas1)
04148 Efferocytosis
115531593 (epas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115531593 (epas1)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115531593 (epas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
SLS1_C
Motif
Other DBs
NCBI-GeneID:
115531593
NCBI-ProteinID:
XP_030196807
LinkDB
All DBs
Position
18:8977908..8984905
Genome browser
AA seq
367 aa
AA seq
DB search
MKADREKRRAISRDAARSRRKKEADVFTDLSHLLPLSPDLVAHLDKPSVLRLTISYMHTS
TLLTDYTAGSCTSWRDPGSYRCAWSVGEEEEGLKKSREAKLRSWGLTEGEAELYLGVSEG
FLLVVSTKGDMVFLSDNVSKHLGLTQVDLIGHSLYDFSHPCDHKEIGNNLRTSGDCCWAV
ERDFVMRMKSTLTHRGRTTNIKSASWKVLHCEGRMKACMSSSFPYFSSTPSSTSYLLLSC
KPLLLCHRLVMTHTFTSQHRLDLRFTRCDSRVKALLGYSPEELQGRSLYQLCHMLDTSRL
NSSHRNLLSMSQSVSGQYRMLVRGGGYVWVESHSALLRPACPRVSSQCSGQSSIPPSCIF
SITYILR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgacagagaaaagagaagggcgatcagccgcgatgcagcgcggagcagacgg
aagaaagaggctgacgtgttcacagacctatcgcacctcctgccgctgtcgcccgacttg
gtggctcacctggacaagccctcggtcctgcgtctgacaatcagctacatgcacaccagc
acgttgctcacagactatactgccggtagctgtacgtcttggagggacccggggagttac
cgatgcgcgtggtctgtgggggaggaggaggagggtctgaagaagagcagagaggccaag
ctgaggagctgggggctgaccgagggggaggctgagctttacctgggggtctccgagggc
tttctgctggtggtctccaccaagggagacatggtgtttctgtctgataatgtctccaag
caccttggcctgactcaggtggatctgattggacacagcttgtatgacttttcccatcct
tgtgaccacaaagaaattggaaataacctccgcacatcaggggactgctgttgggctgtc
gagagagactttgtcatgaggatgaagagcactttgacacacagggggaggaccaccaac
atcaagtctgcatcttggaaggtccttcactgtgagggccgcatgaaggcgtgcatgtcc
tcctccttcccctacttctcctccaccccctcctccacctcctacctcctcctgagctgc
aaacccctgctgctctgccaccggctggtcatgacacacaccttcaccagccagcaccgc
ctggacctgcgcttcacgcgctgcgacagcagggtgaaggccctgttgggctacagtcct
gaggagctgcagggccgctccctctaccagctgtgtcacatgctggacacgagccgcctc
aacagtagccaccgcaacctgctgtctatgagccagtcggtgagcggtcaatacaggatg
ctggtgcggggcgggggctacgtgtgggtggagagccacagcgccctcctcaggcccgcg
tgccccagagtctcctcccagtgctccggccagagctccatcccgccttcctgtatcttc
tccatcacctacatcctcaggtag
DBGET
integrated database retrieval system
