Gadus morhua (Atlantic cod): 115531909
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Entry
115531909 CDS
T10832
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115531909 (sec16a)
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115531909 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
115531909
NCBI-ProteinID:
XP_030197106
Ensembl:
ENSGMOG00000016912
UniProt:
A0A8C5CPW8
LinkDB
All DBs
Position
19:complement(2102548..2127953)
Genome browser
AA seq
2547 aa
AA seq
DB search
MQPPPRNGPPGASGPSSAGPNVFRRLRPLKHTSTAPAAMMGPPVAMRGPPAEMMVPPSSN
HPMTDPFAFGMQAPAPMAAAAAGPPMVPNSNAPFPQMAPNSLYSQAGPGMHPQPVDHQQA
AASGPHSSYQAGVNLFTPQGVAPPTQQHPGQLPPQVTQGYTQPNSEQGYFNSIAQPPPTT
HNVSSMASNSMPSQPYFHQDHQGEHAPQAMPFQPVPPTTSSSHWSPDHGSRPPSLQNYFQ
PTTDPPLQPFNIPHQPQAYPSHPPSPHHNAPTPPTQPEPSQVQAPLPQDPEMVPTSSQWP
DPNVPQQHESHFQVQSYFSQGAGTQDTWFNQPSQDPVYHQMGIGMSPTPNRPTSAGPQRS
TPTTDPLPGAAPLPYAQESGSVSMFFRGSDVENEETLAGEGKKAVNGMQGSGQLHSHPQL
PPLPHVSQAEPPTGDYHGASFSSNPHIPYMNEGLYACPVNIQKPSEPQLDHVENLECVPN
QEVLPSKTIGSPSGEVGPGEDHYEAGPNLETPDTIPRPMRSASVSSSYSNVSHGSGTGSR
RHQGVMGTFIQQESPRLVEDPNIAVAAGGYFEQIDTSPATDVGAHHSSQEHIYTSQPPTP
SPPKPTGVFQASANSSFEPVRSHGVGVRPIEVDRAKMVAEGGGDAVPGNLEQPPDNIENI
YGTGHPLTTGPGVPHLVHPVVLSHSRPSSRAFGAHRPCESPATTLWAQNDPSTLGANILL
APAAPPVLAPLREPTNDVIQPPEDGPLDLQPPQRTNATSQQHSENLENPPKVSVGDLSDS
QGQLGYASLLVADTLHQPVLIAPPVSNYSVIPPTAQAAAPRQQTSPPMRPPSQGHGASIS
LPPLLSADQNQSFMALPMINPSTAQSQGPLNLARDQTECERWETTALPLSQAACLPLSRA
QSMDGESHSALPINPQLSNYELLDFSMHQSQSQTQASGHPSPLQGSPQASNAPGFYLQVT
KDAQQGLRGEGERIPQAPVSNAALHAPEAAPTPEAAPTRAAPNPQQPLAEHPQMPNVQPA
AQGPAVSRPPSAHVFTGGSGPATAAAPSAVPPPPAAAASYPGLQGQVPPGAPQPNPAAPP
RPPSSVGSQGYGPAQGAPVQGYGGFHAGPYGEYPDGRAPHPPGQYPPPGDPRAQPYYHED
PYRRFDPWYGRYEGQNPAYRDPNTQYREPQPERPSSRSSQYSDRSSSRQGYPEDYQRANR
SAYEEYYADYYKKPYDYGYNSGAYDPRYRGYYDQSYWYNYDEAYRGRDPYYNPQLQQQQQ
QQQQQQQQLQQPPQLPQQQQQPFARPEGYEDQWRYYPGYDASFDDDYRRREESVLDDFDR
RSVHSEMSAHSLHSNHTQHSRHSASSVRSQQSQVYRSQPDLTVYDTTAPILSDPYRQYPD
QTDGSQSYTQYTYPADYSTESTWIAPEQPPPRPHTPEKFIMPHRCARFGPGGHLVQVLAN
MPSAGQPALVDIYNMETILQDTNEQAELRSFPGPLVKEETHKGDVIKFSQNKALECVRNK
DLLDRDSACLLWDFIMLLCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLIDFNNEP
LERAEEEPGAGPLSLLSDTFMTVPENVGKETERFRELLLFGRKKDALEAAMKGGLWGHAL
LLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASAISCGEEKWGDWRPHLAM
VLSNLTHTPDLDTRTITTMGDTLASKGLVDAAHFCYLMAQVGLGVYTKKSTKMVLVGSNH
SLTFYQFATNEAIQRTEAYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLSAQAFHYCE
VISKSVLTQPSYHSSVIISQLIQLSEKLRFYDPQLKEKPEQELFFEPDWLLHLRQLDGQI
RMGAIAYNADRATPTQYDCASPSSELEQTLPAEPYNNTMPQEMNGASSDNPLMSSLLPGP
PPQAVQLMPPAPTTILQDGMVPQHHPSEVHQFYPVPPGPAAGYLPQVPDSGPSPYEPQQP
QPSDMYPPPLQQQPSSSPPHPGHMGSHMPPQMNQQPPHQMNQQPPHQMNQQPPHLMNQHP
PPQMHQQPPPQMNQHPPPQMHQQPPPQMNQQPPDQMNQQPPHPMNQQPPHPMNQQPPHQM
NQQPPHQMNQQPPHQMNQQPPHQMNQQPPHQMNQQPPHLMNQQPPHLTNQAPYPVNQPSP
HQMTPMPPHPVSQPSPHTPPSPGHMPMMDQHVLGQPEGQPLPPMSNAMRRNSFTPQTDFY
DQSAHMGAGRRSRTSSQSSMHMASGRRSRTTSESSTHSGGRERSNSSAMQMSSSPPPSIP
EQPRMEDPKKAKKHSPKKGGGGGGGGSGGGGWLNWLYRKGKNEAHLPDDKNKSIVWDEKR
QKWVDQNEPEEESKPLPPPPPGFKTGPPMLGPGGPGRPPGGGPPVNMFSRKAGTKSRYVD
ILNPSKTSRPGGMGPAPADIFAPLAPMPTNLFVPGAAPEDQQPMEASEGGAQEQAAPSAG
AAPQMFNPTLMPPGGDGLPESGELSRSSSMSSLSREVSQHLNQGQQAPPAGGVTFYNPAQ
FAQPSAQSGGPRGQGRFGGQRQYPVVK
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcctccacggaatgggcctcctggggcttccggcccttcctctgcagggccc
aacgtcttccgcaggctaagacccctcaagcacacatccacagcaccagctgcaatgatg
ggacccccagttgcaatgaggggacccccagctgaaatgatggtacccccatctagtaac
catccaatgacagacccttttgcttttgggatgcaagccccagcacctatggctgctgct
gctgcaggtcctcctatggtacccaatagcaacgctcccttcccacagatggctcccaat
agcctgtattcgcaggctggcccaggcatgcatccacagccagtggatcaccaacaagct
gctgcctccggtccgcactcatcctatcaggccggagtaaaccttttcacccctcaaggt
gtagctcctcctactcaacagcacccaggacagctaccgccgcaagtcacacaaggatat
acacaaccaaattcagaacagggctattttaattcaatagcacagccaccaccgacgacc
cataatgtctcgtccatggcttcaaactcaatgcctagccagccatatttccatcaggac
caccagggggagcatgctcctcaagccatgcccttccagccagtgcctcccacaacatca
tcctctcattggtcccctgatcatgggagtcgccctccgtcattgcaaaactatttccag
ccaaccactgaccccccattgcagccctttaacatccctcaccagcctcaagcataccct
tcccacccaccatcccctcatcataacgcccccactcctccaacacagcccgagccttcc
caagtgcaggcacctcttccccaggacccggagatggttcctacaagctcacaatggcca
gatccaaatgtacctcagcagcatgaatcacacttccaggttcagagctacttcagtcaa
ggcgcaggcacacaagatacctggtttaaccagccgtcacaggatccagtctaccaccaa
atgggcattggcatgagccccaccccaaaccggcccacctcagctggacctcaacgtagt
accccaactactgatcctttaccaggagcggccccacttccatatgcacaggaatctggt
tctgtctcaatgtttttcagaggaagtgatgtggagaacgaagagacactggctggagag
ggtaagaaagctgtgaatggtatgcagggatccggccagcttcacagccatccacaactg
cctccactgccccacgtcagtcaggcagagcctccaacaggggattaccatggagcctct
ttcagcagcaatccacacataccgtacatgaatgagggcctttacgcatgcccagtgaac
atccaaaagccttctgaacctcagcttgaccacgtggagaatcttgagtgtgtacccaac
caggaagtgttgcccagtaaaaccattggtagcccctctggtgaggtaggccccggagaa
gaccattatgaagcaggtcccaaccttgagacgccagatacgattccacgaccaatgaga
tctgctagtgtgtcatcaagctacagtaatgtaagtcacggtagtggaactgggtcccgc
cgacatcagggggtcatgggcacttttatacagcaagaaagccctcgcctcgttgaggat
cctaacatcgctgtggctgctgggggatactttgagcagattgacacttctccagctact
gatgtgggtgcgcaccatagctcccaggagcatatctataccagtcagccccctacaccc
agcccccccaaacctactggtgtattccaggccagtgcaaacagctcttttgaacctgta
cgctcgcatggagttggtgtacgccccattgaagttgacagggcgaaaatggttgctgaa
gggggtggcgatgctgtacctggcaacctggagcagcccccagataatattgaaaacatt
tatggaaccggtcatcctctaacgactggacctggagttcctcacctcgtacaccctgtg
gttctgtctcactcccggccgtcttcccgtgcgtttggcgcccaccggccctgtgaaagc
cctgccactactctatgggctcaaaatgacccttccaccttaggagcaaacatccttctt
gcccctgctgctcccccagtccttgccccgctacgggaacctactaacgatgtcatacag
ccccctgaagatggtcctttggaccttcaacccccccagagaaccaatgccacttcacag
cagcactcagagaatctagagaacccgccgaaggtgagtgtgggggatctctccgactcc
caaggtcaactgggctatgcgtctctcttggtggccgacacgcttcaccagcctgtgttg
attgctcctccggtgtccaattatagtgtgattcctcccactgcacaagctgctgctcca
aggcagcagaccagtccacccatgagacccccctcacaggggcacggggccagtatctcc
ctaccacctctattatcggccgatcagaaccaatccttcatggcattaccaatgatcaac
ccctctactgcccagagtcagggcccacttaacctggctcgagatcagacagaatgcgaa
agatgggaaaccacagctttgccgttatcacaggccgcatgcctccctctgtcaagggct
caatcaatggatggggagagccactctgctctccctataaatccacaactttcaaattat
gaactgcttgatttttctatgcaccaatcacagagccaaacgcaggcctcaggccaccct
tcccctctacaagggtctccacaggctagtaacgctcccgggttctacctgcaggtcacc
aaagatgctcaacaggggctaaggggcgaaggtgaacgcattccccaggccccagtgtct
aatgctgccctacatgcacctgaagctgcccccacacctgaagctgcccccacccgggca
gctccaaacccccagcagccgctcgcagagcatccccagatgcccaacgtccaacctgct
gcacagggtcctgcagtgagtcgacctccttcagcccacgttttcactggagggagtggt
cccgccacagctgctgctccttctgcggttcctcctcctcctgctgctgctgcttcttac
cctgggctccagggacaagtccctccaggggctccccagccaaaccctgccgcaccccca
cgtcccccttcctctgtgggtagccagggttatggccctgctcaaggcgcaccggtccag
gggtacggaggtttccatgcaggtccctatggagaataccctgatggcagagcgccccat
ccccctggccagtatcctccgcctggggatccaagagcacagccttactaccatgaggac
ccatacagaaggtttgatccatggtatggaagatatgaaggacagaacccggcctaccga
gatcccaacacccagtaccgagagcctcagcccgagaggcccagctcccggtccagtcag
tactcggacaggtcgtcatccaggcaaggctacccggaagactaccagagagccaaccga
agtgcctacgaggaatattatgcagactattacaagaaaccgtatgactatggctacaat
tcaggtgcctacgatcccagatacagaggctactacgaccagtcctactggtacaactat
gatgaggcctacagagggcgagacccctactacaacccccaactacaacaacagcagcag
cagcagcaacaacaacaacaacaactgcaacaacccccacaactaccacaacaacaacaa
cagccctttgctaggccggagggctacgaggaccagtggcgctactacccgggctacgac
gccagcttcgatgacgactaccgccggagagaggaatccgtcttggatgactttgaccgg
cgcagcgtccacagcgagatgtcagcccacagcctgcacagcaaccacacccagcacagc
cgacacagcgcatccagtgtccggtcgcagcagagtcaggtgtaccggagccaacctgac
ctgacggtgtacgacaccaccgcacccatcctgagtgacccctacagacagtacccggac
cagacggacggcagccagagctacacccagtacacctaccctgcggactacagcacagag
tccacctggatcgcacctgagcaaccgcccccccgcccacacaccccagagaagttcatc
atgccccaccgctgtgcccgctttgggcccggggggcacctggtccaggtgctggccaac
atgccctcggctgggcagccggccctggtggacatctacaacatggagaccattctccag
gacaccaatgagcaggcagagctacgctccttccccggcccccttgtcaaggaggagacc
cacaagggagacgtgatcaagttctcccagaacaaggccctggagtgcgtgcggaacaag
gacctgctggaccgtgactctgcctgcctgctgtgggacttcatcatgctcctctgccga
cagaacgggacggtggtggggacggacatcgccgacctgctgctcaaggagcaccgctca
gtgtggctgcctggcaagagtcccaacgaggccaacctgatcgacttcaacaacgagccg
ctggagcgggcggaggaggagccgggggcggggcctctgtccctcctgtcggacaccttc
atgacggtgccagagaacgtcggcaaggaaacggagcgcttccgggagctgctgctgttt
ggccgcaagaaggatgctctagaagcggcgatgaagggaggtctgtggggacacgcgcta
ctattggccagtaagatggacaaccggacgcacgcccgtgtcatgaccaggtttgccaac
agtctgcccatcaacgaccctctgcagaccgtctaccagctgatgtctgggaggatgccc
gcctccgccatctcctgtggagaggagaagtggggcgactggcgccctcatctggccatg
gtgctgtccaacctcacccataccccggacctggacacccgcaccatcaccaccatgggg
gacaccctggcttccaagggcctcgtcgatgctgctcacttctgctacctgatggcccag
gtgggacttggggtttacaccaagaagagcaccaagatggttctagttggctccaaccac
agtttaaccttctaccagtttgcgaccaacgaggcaatccagaggacggaggcctacgag
tacgcccagtccctgggctcccagccctgctccctgcccaacttccaggtgttcaagttg
atctacgcctgccgcctggctgaagcaggcctcagcgcacaggccttccactactgtgag
gtgatctccaagagtgtcctcacgcagccctcgtatcactcctctgtcatcatcagtcag
ctgatacagctgtcggagaagctgcggttctacgacccccagttgaaggagaagccggag
caggagctgttctttgagccagattggctgctgcacctcagacagctggatggacagatc
aggatgggtgcgatagcctacaatgcagacagggccacacccacgcagtacgactgtgct
tccccgagctctgagctggagcagacccttccagcggagccctacaacaacaccatgcct
caagagatgaacggagcctcctcagacaaccccctgatgagctccctgctgcccgggccg
ccgccccaggccgtgcagctgatgcctccagccccaactaccatcctccaagacggcatg
gttccacagcaccacccatcagaggtccaccagttctaccccgtgccccccggcccggcc
gcaggctacctaccgcaggtccccgactccggcccctctccctacgagcctcagcagccc
cagccctcggacatgtaccctccacctctccagcagcagcccagctcctcgccccctcac
ccgggacacatgggctctcacatgcctccccagatgaaccaacaacctccccatcagatg
aaccaacaacctccccatcagatgaaccaacaacctccccatctgatgaaccaacatcct
cccccccagatgcaccaacaacctcccccccagatgaaccaacatcctcccccccagatg
caccaacaacctcccccccagatgaaccaacaacctcccgatcagatgaatcaacaacct
ccccatccgatgaaccaacaacctccccatccgatgaaccaacaacctccccatcagatg
aaccaacaacctccccatcagatgaaccaacaacctccccatcagatgaaccaacaacct
ccccatcagatgaaccaacaacctccccatcagatgaaccaacaacctccccatctgatg
aaccaacaacctccccatctgacgaaccaagccccttatccggtaaaccagccctctccc
catcaaatgactccgatgcctccacacccggtgagtcagccgtccccacacacgcccccc
tcccctggacacatgcccatgatggatcagcatgtcctaggccagcccgagggtcagccc
ctgcctccgatgtctaacgccatgcgcaggaactctttcacgccgcagacggacttttac
gaccaaagcgctcacatgggtgccgggagaagatcgagaacttcttcacagtcttcaatg
cacatggcctccggccgccgctcccggaccacctccgagtcctccacccactccgggggg
cgggagcgcagcaactcctcggccatgcagatgtcttcgtcgccgcccccctccatccct
gagcagccccgcatggaggaccctaagaaggccaagaagcactcccccaagaagggtgga
ggtggcggcggcggcggcagcggtgggggcggctggttgaactggctctataggaagggc
aagaatgaggctcacttgcccgatgacaagaacaaatctatcgtgtgggacgagaagagg
cagaagtgggtggaccagaatgaaccagaagaggagagtaaacccctcccgccacctcct
cctggattcaagactggtcctcctatgctgggccctggagggcccggcaggccccctgga
ggggggcccccggtcaacatgttctccaggaaagcaggcactaagagccgctatgtggac
atcctgaaccccagcaagacatcgcggcccggggggatggggcccgccccggcagacatc
tttgctccgctggctcccatgccaaccaacctgtttgtgccgggggcagccccagaggat
cagcagcccatggaggccagtgaaggaggcgcccaggagcaggctgctcccagtgcaggt
gctgcaccacagatgttcaacccaacgctgatgcctccagggggagatggcctgcctgag
tctggggagctgtcacgttctagctcaatgagctctttatcacgtgaagtgagtcagcat
ttaaaccagggacagcaagccccacccgctggaggcgtgaccttttataaccccgcccaa
tttgcacagcccagtgcacagtccggagggccgcgggggcaaggccgcttcgggggccag
aggcagtacccagtggtgaaatag
DBGET
integrated database retrieval system
