Gadus morhua (Atlantic cod): 115531991
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Entry
115531991 CDS
T10832
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmh03009
]
115531991 (ddx55)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115531991 (ddx55)
Ribosome biogenesis [BR:
gmh03009
]
Eukaryotic type
Pre-60S particles
Helicases
115531991 (ddx55)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
115531991
NCBI-ProteinID:
XP_030197256
Ensembl:
ENSGMOG00000017762
UniProt:
A0A8C5A542
LinkDB
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Position
19:complement(10465760..10470739)
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AA seq
598 aa
AA seq
DB search
MDNITEGTWESLPVKLNDNILETLREMKFTHMTPVQSACIPLFMRNKDVAAEAVTGSGKT
LAFVIPIIEILLKREDKLKKMQVGALVITPTRELALQISEVFEGFLLKFPQFKQILLIGG
SNPIEDVEKFKEHGANIVIATPGRLEDMFRRKADGLDLSILVKTLDVLVLDEADRLLDMG
FVASLNVILAFLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATATQKTPA
RLCNYYFICRIEEKFNNMVAFLKEHIDEKHLVFFSTCASVEYYGRALETLFKKADIRCIH
GKMKNKRNKIFADFRALESGILVCTDVMARGIDIPDVNWVLQYDPPSNASAFVHRCGRTA
RIGNQGSALVFLLPMEESYVTFLSINQKCPLERMEPIEDVMDILPKVKAMALADRAMYDR
GMRAYVSSVQAYAKHECSLIFRVKDLDFSAMAKGFALLRMPKMPELKDKSFPDFVRTDID
TDTIRYKDKAREKLRRKMLAELKERGPAPLVRRNVVRNTSWSKQKQKQDRKRKKSAKRQL
GEGSDEEEDEDLKELLNDTRLLKRLKKGKISEEDFNKQMEDVPLSSTQTGSPKATDDA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacaacataacagaagggacgtgggaaagtttacctgttaaactaaacgacaacata
ttagaaacgctcagagaaatgaagtttacgcatatgacaccagtacagtccgcctgcatt
ccactattcatgcgtaataaggatgttgctgccgaagcggtaactggcagtgggaagaca
ctggctttcgtaattccaataatagaaattctactaaaaagagaagacaaactcaagaaa
atgcaggtgggtgcattggtgattactcccaccagagagttggcccttcagatcagcgaa
gtgtttgagggattcctcctgaagttcccgcagttcaagcagattttgttgattggtggc
agtaacccaatagaagacgtggagaagttcaaagaacatggggccaatatagtcatcgcc
acgcccggtcgcttggaggacatgttccgccggaaggctgatggacttgatctgtccatc
ctggtcaagaccctggacgtgctggtcctggacgaggcggacagactcctggacatgggc
ttcgtggctagtctgaacgttatcctggccttcctgccaaagcagaggaggacgggcctg
ttctcggccacccaaacccaggagctggagaagctggtcagggcgggcctcaggaaccct
gtacgcatcacggtcaaggagaagggggtggccgctaccgccacccagaagactcccgca
agactctgcaactactactttatttgtagaattgaggagaagttcaacaacatggtggca
ttcctcaaagagcacatagatgagaagcatcttgtgtttttcagcacatgcgcgtcagtg
gagtattatggccgcgcgttggagaccctcttcaagaaagccgacatccgctgtatccac
ggcaagatgaaaaacaaacgcaacaagatcttcgcggacttccgggcgctcgaaagtggg
attctggtgtgtacagacgtcatggcccgaggaatcgatatccctgatgtcaactgggtc
ttacaatacgaccccccaagtaatgccagtgcgtttgtccatcgctgtggacgtacagca
cgcatcggcaatcagggaagtgccctggtcttcctgttacccatggaggagtcctatgtg
accttcctgtccatcaaccagaaatgtccccttgaaaggatggagcccatcgaggatgtg
atggacatcctacccaaggtgaaggccatggcgctggccgaccgagccatgtacgaccgg
ggaatgagagcctacgtctccagcgtgcaggcctacgccaaacacgagtgtagcctcatc
ttcagagtcaaagatcttgactttagcgccatggccaaagggttcgccctgctgcggatg
cccaagatgcccgaacttaaggacaagtcgtttccagacttcgtcaggacggatatcgac
acggacaccatccgctacaaggacaaggcccgggagaagctgaggcggaagatgctggcc
gagctgaaggagcgcgggccggccccgctggtcaggaggaacgtggtgaggaacacgtcg
tggtccaagcagaagcagaagcaggaccgcaagaggaagaagtctgccaagaggcagctt
ggcgagggttctgatgaggaggaggacgaggacctgaaggagctcctgaacgacaccagg
ctgctgaagaggctcaagaagggaaagataagcgaggaagactttaataaacagatggag
gacgtaccgctgagctccacccagaccggatccccaaaggccaccgacgacgcctga
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