Gadus morhua (Atlantic cod): 115532008
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Entry
115532008 CDS
T10832
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115532008 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115532008 (trim32)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115532008 (trim32)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115532008 (trim32)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
Vgb_lyase
Baculo_IE-1
zf-RING_4
DUF3117
Haem_bd
Motif
Other DBs
NCBI-GeneID:
115532008
NCBI-ProteinID:
XP_030197283
Ensembl:
ENSGMOG00000033212
UniProt:
A0A8C5A545
LinkDB
All DBs
Position
19:complement(9522718..9530185)
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AA seq
690 aa
AA seq
DB search
MAGAASTTTTSLDADVMREVLECPICLETYSSDQLRPKLLQCGHTVCRQCLERLLASTIN
GVRCPFCSKVSRMSNIAQLADNLTVLKLLDCTSSCGAAAALMCRSCGSRLPHQYCHDCST
VFCDPCKLEGHQHRGHSVQPIRAAAEQRRKELGAKLAALREAMGQIQKKKVFIDNVSKSL
RAKCRAVQQEYADCELSLQEELGRAQRGFAASMAEIEKLNRQVLEEQTYLLHIAEVQVVS
RCDYLTMQARQSDVALLENAAGCPDDAELDLRGSLPKTLKLQEPLLLKADRQRALEVAKL
TAKMCAVSVDDEDEALELAVEDGLAGLEGATGGEASDAPQESMDLYRDVNMVAAAEEAVC
ASPVNFKSKSLDEGGGPSPGAAGADAGPHLCQFVKRMGCKGNLPGMFNLPVSICVSSQGE
VLVADRGNYRVQIFNRKGFQRQIQRNASSIDNFVLSFLGADLPNLVPLSIAVNAAGLIGL
TDNYDNSVKVYTMEGHCVACHKNQLIKPWGITATPSGQFVVTDVEGGKLWSLAVERNGGV
VSYSRLCSAVRPKFVACDAEGTVYFTQGLALNFEKRHNELQLEGGFSIGSVSSEGLLGKQ
LSHFFAENEDFRCITGMCVDANGDLLVTDSGRKEILRFPKEGGFHVLIREGLTCPVGVAI
TQKGQLLVLDCWDHCVKVYAYVHKRRSSTC
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccgccagcaccaccaccacctccctggacgcggatgtcatgcgggaggtg
ctcgagtgccccatctgcctggagacgtacagctcggaccagctgaggcccaagctcctg
cagtgcggccacacggtgtgccgccagtgcttggagcggctgctggccagcaccatcaac
ggcgtgcgctgcccgttctgcagcaaagtgtcccgcatgagcaacatcgcccagctggcc
gacaacctcaccgtgctcaagctcctggactgcaccagctcctgcggggcggcggccgcc
ctcatgtgccgctcgtgtggcagccgcctgccgcaccagtactgccacgactgctccacg
gtcttctgcgacccctgtaagctggagggccaccagcaccggggccactcggtgcagccc
atccgagccgcggccgagcagcggcgcaaggagctgggggccaagctggccgctctcagg
gaggccatgggccagatccagaagaagaaggtgttcatcgacaacgtgtccaagtctctg
agggccaagtgccgggcggtgcagcaggagtacgccgactgcgagctgagcctccaggag
gagctgggccgcgcgcagcggggcttcgccgcctccatggcggagatcgagaagctgaac
cgccaggtgctggaggagcagacgtacctgctgcacatcgccgaggtgcaggtggtgtct
cgctgcgactacctgaccatgcaggcgaggcagagcgacgtggcgctgctggagaacgcg
gcgggttgccccgacgacgccgagctggacctgaggggcagcctgcccaagaccctgaag
ctgcaggagcccctgctgctcaaggcggaccgccagagggccctcgaggtggccaagctc
acggccaagatgtgcgccgtcagcgtggacgacgaggacgaggcgctggagctcgccgtg
gaggacggtctggcggggctggagggcgccacgggcggcgaggcgtcggacgccccgcag
gagtcgatggacctctaccgagacgtcaacatggtggcggccgccgaggaggcggtgtgc
gcctcgcccgtcaacttcaaatcaaagtccctggacgagggaggagggccctcgcccggc
gcggccggggccgacgcggggccccacctctgccagttcgtcaagaggatggggtgcaag
gggaacctgccgggcatgttcaacctgccggtgagcatctgcgtgtcgtcgcagggcgag
gtgctcgtggcggaccgcggcaactaccgcgtgcagatcttcaaccgcaagggcttccag
cggcagatccagcgcaacgccagcagcatcgacaactttgtgctgagcttcctcggcgcc
gacctgcccaacctggtgccgctgtccatcgccgtcaacgcagcggggctcatcggcctg
actgacaactacgacaactcggtgaaggtgtacaccatggagggccactgtgtggcctgc
cacaagaaccagctgattaagccgtggggcatcacggccacgccctcgggccagttcgtg
gtgacggacgtggagggcggcaagctctggagcctggcggtggagcgcaacgggggcgtg
gtcagctacagccgcctgtgctcggcggtgaggcccaagttcgtggcgtgcgacgccgag
ggcacggtgtacttcacgcaagggctggcgctcaacttcgagaagcgccacaacgagctt
cagctggagggcggcttctccatcggctcggtgagcagcgagggcctgctgggcaagcag
ctgagccacttcttcgccgagaacgaggacttccgctgcatcacgggcatgtgcgtggac
gccaacggggacctgctggtgacggacagcggccgcaaggagatcctgcgcttccccaag
gagggcggcttccacgtgctgatccgcgaggggttgacctgcccggtgggcgtggcaatc
acccagaagggacagctgctggtcctggactgctgggaccactgcgtgaaggtgtacgcg
tacgtgcacaagaggcgctcgtccacctgctag
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